Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV1A0A0A0MS02 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRGV1A0A0A0MS02 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 PBX2P1-201ENST00000493219 1291 ntBASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 AP005435.1-201ENST00000529293 1178 ntBASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 AC138932.1-201ENST00000534164 6830 ntBASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
TRGV1A0A0A0MS02 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 OXCT2P1-201ENST00000447263 1535 ntBASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 AC126544.1-201ENST00000580842 1059 ntBASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRGV1A0A0A0MS02 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 BX842568.3-201ENST00000418104 571 ntBASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.49■□□□□ 0.07
TRGV1A0A0A0MS02 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 FAM99A-202ENST00000538190 1989 ntBASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 AC233992.3-201ENST00000607491 485 ntBASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRGV1A0A0A0MS02 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 AC008764.7-201ENST00000593779 1081 ntBASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms