Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.4■□□□□ 0.86
VCX3BQ9H321 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCX3BQ9H321 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
VCX3BQ9H321 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.4■□□□□ 0.86
VCX3BQ9H321 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.4■□□□□ 0.86
VCX3BQ9H321 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCX3BQ9H321 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCX3BQ9H321 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.4■□□□□ 0.86
VCX3BQ9H321 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.4■□□□□ 0.86
VCX3BQ9H321 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.4■□□□□ 0.86
VCX3BQ9H321 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.4■□□□□ 0.86
VCX3BQ9H321 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCX3BQ9H321 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCX3BQ9H321 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCX3BQ9H321 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VCX3BQ9H321 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VCX3BQ9H321 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VCX3BQ9H321 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VCX3BQ9H321 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VCX3BQ9H321 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
VCX3BQ9H321 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
VCX3BQ9H321 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 AC092296.2-201ENST00000589470 999 ntBASIC20.38■□□□□ 0.85
VCX3BQ9H321 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
VCX3BQ9H321 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.38■□□□□ 0.85
VCX3BQ9H321 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
VCX3BQ9H321 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
VCX3BQ9H321 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.37■□□□□ 0.85
VCX3BQ9H321 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VCX3BQ9H321 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VCX3BQ9H321 AL020996.1-203ENST00000536896 2307 ntBASIC20.37■□□□□ 0.85
VCX3BQ9H321 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
VCX3BQ9H321 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
VCX3BQ9H321 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
VCX3BQ9H321 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
VCX3BQ9H321 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.37■□□□□ 0.85
VCX3BQ9H321 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.37■□□□□ 0.85
VCX3BQ9H321 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VCX3BQ9H321 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
VCX3BQ9H321 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
VCX3BQ9H321 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VCX3BQ9H321 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.37■□□□□ 0.85
VCX3BQ9H321 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VCX3BQ9H321 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VCX3BQ9H321 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCX3BQ9H321 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VCX3BQ9H321 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VCX3BQ9H321 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCX3BQ9H321 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
VCX3BQ9H321 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.36■□□□□ 0.85
VCX3BQ9H321 ECEL1P2-201ENST00000461596 1295 ntBASIC20.36■□□□□ 0.85
VCX3BQ9H321 AC026202.3-201ENST00000600805 1127 ntBASIC20.36■□□□□ 0.85
VCX3BQ9H321 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCX3BQ9H321 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
VCX3BQ9H321 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VCX3BQ9H321 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VCX3BQ9H321 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
VCX3BQ9H321 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
VCX3BQ9H321 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
VCX3BQ9H321 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
VCX3BQ9H321 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.35■□□□□ 0.85
VCX3BQ9H321 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.35■□□□□ 0.85
VCX3BQ9H321 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.35■□□□□ 0.85
VCX3BQ9H321 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
VCX3BQ9H321 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VCX3BQ9H321 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.35■□□□□ 0.85
VCX3BQ9H321 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.35■□□□□ 0.85
VCX3BQ9H321 RAP2CP1-202ENST00000605179 643 ntBASIC20.35■□□□□ 0.85
VCX3BQ9H321 OXCT2P1-201ENST00000447263 1535 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 343.8 ms