Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
RFX6Q8HWS3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.3■■□□□ 1.16
RFX6Q8HWS3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RFX6Q8HWS3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RFX6Q8HWS3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.3■■□□□ 1.16
RFX6Q8HWS3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RFX6Q8HWS3 MIR4767-201ENST00000582827 78 ntBASIC22.3■■□□□ 1.16
RFX6Q8HWS3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RFX6Q8HWS3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.3■■□□□ 1.16
RFX6Q8HWS3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 AC008406.3-201ENST00000620001 1374 ntBASIC22.29■■□□□ 1.16
RFX6Q8HWS3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 AL136162.1-201ENST00000607711 1078 ntBASIC22.29■■□□□ 1.16
RFX6Q8HWS3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.29■■□□□ 1.16
RFX6Q8HWS3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RFX6Q8HWS3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 AC026471.6-201ENST00000622954 1905 ntBASIC22.28■■□□□ 1.16
RFX6Q8HWS3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 AC024257.2-201ENST00000549699 147 ntBASIC22.28■■□□□ 1.16
RFX6Q8HWS3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFX6Q8HWS3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.27■■□□□ 1.16
RFX6Q8HWS3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
RFX6Q8HWS3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 AC244015.2-201ENST00000616358 1861 ntBASIC22.26■■□□□ 1.15
RFX6Q8HWS3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFX6Q8HWS3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.25■■□□□ 1.15
RFX6Q8HWS3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.25■■□□□ 1.15
RFX6Q8HWS3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFX6Q8HWS3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFX6Q8HWS3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFX6Q8HWS3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.25■■□□□ 1.15
RFX6Q8HWS3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFX6Q8HWS3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFX6Q8HWS3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RFX6Q8HWS3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFX6Q8HWS3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 AL137060.1-201ENST00000618151 2648 ntBASIC22.24■■□□□ 1.15
RFX6Q8HWS3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 BX842568.3-201ENST00000418104 571 ntBASIC22.24■■□□□ 1.15
RFX6Q8HWS3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 AC135279.3-201ENST00000610945 1311 ntBASIC22.24■■□□□ 1.15
RFX6Q8HWS3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX6Q8HWS3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms