Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CCDC30Q5VVM6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC27.48■■□□□ 1.99
CCDC30Q5VVM6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC27.48■■□□□ 1.99
CCDC30Q5VVM6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC27.48■■□□□ 1.99
CCDC30Q5VVM6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC27.48■■□□□ 1.99
CCDC30Q5VVM6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
CCDC30Q5VVM6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CCDC30Q5VVM6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.47■■□□□ 1.99
CCDC30Q5VVM6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CCDC30Q5VVM6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC27.47■■□□□ 1.99
CCDC30Q5VVM6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CCDC30Q5VVM6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.47■■□□□ 1.99
CCDC30Q5VVM6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC27.47■■□□□ 1.99
CCDC30Q5VVM6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CCDC30Q5VVM6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.47■■□□□ 1.99
CCDC30Q5VVM6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 KRT87P-202ENST00000534226 1464 ntBASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 AC092053.2-201ENST00000640557 1818 ntBASIC27.46■■□□□ 1.99
CCDC30Q5VVM6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
CCDC30Q5VVM6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC30Q5VVM6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC27.45■■□□□ 1.98
CCDC30Q5VVM6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC27.45■■□□□ 1.98
CCDC30Q5VVM6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC30Q5VVM6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC30Q5VVM6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC30Q5VVM6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
CCDC30Q5VVM6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC30Q5VVM6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CCDC30Q5VVM6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 TESC-206ENST00000541210 936 ntTSL 3 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 IKBKGP1-201ENST00000612193 1073 ntBASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.44■■□□□ 1.98
CCDC30Q5VVM6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.43■■□□□ 1.98
CCDC30Q5VVM6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CCDC30Q5VVM6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CCDC30Q5VVM6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CCDC30Q5VVM6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.43■■□□□ 1.98
CCDC30Q5VVM6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CCDC30Q5VVM6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
CCDC30Q5VVM6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 KRT19P1-201ENST00000405746 1186 ntBASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 AC233723.2-201ENST00000623798 2106 ntBASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.42■■□□□ 1.98
CCDC30Q5VVM6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 AC092437.1-201ENST00000624794 1048 ntBASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.41■■□□□ 1.98
CCDC30Q5VVM6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC30Q5VVM6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.4■■□□□ 1.98
CCDC30Q5VVM6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC30Q5VVM6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.4■■□□□ 1.98
CCDC30Q5VVM6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC30Q5VVM6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CCDC30Q5VVM6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC27.4■■□□□ 1.98
CCDC30Q5VVM6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC27.39■■□□□ 1.98
CCDC30Q5VVM6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.39■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms