Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
NDUFA1O15239 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA1O15239 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NDUFA1O15239 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NDUFA1O15239 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA1O15239 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.64□□□□□ -0.07
NDUFA1O15239 MIR6722-201ENST00000617286 78 ntBASIC14.64□□□□□ -0.07
NDUFA1O15239 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFA1O15239 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA1O15239 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.64□□□□□ -0.07
NDUFA1O15239 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA1O15239 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.64□□□□□ -0.07
NDUFA1O15239 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NDUFA1O15239 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NDUFA1O15239 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NDUFA1O15239 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA1O15239 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NDUFA1O15239 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA1O15239 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA1O15239 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFA1O15239 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA1O15239 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA1O15239 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA1O15239 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.63□□□□□ -0.07
NDUFA1O15239 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.63□□□□□ -0.07
NDUFA1O15239 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA1O15239 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.63□□□□□ -0.07
NDUFA1O15239 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA1O15239 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NDUFA1O15239 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NDUFA1O15239 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.62□□□□□ -0.07
NDUFA1O15239 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
NDUFA1O15239 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.62□□□□□ -0.07
NDUFA1O15239 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.62□□□□□ -0.07
NDUFA1O15239 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFA1O15239 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.62□□□□□ -0.07
NDUFA1O15239 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 LINC01529-204ENST00000636474 1715 ntBASIC14.62□□□□□ -0.07
NDUFA1O15239 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
NDUFA1O15239 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.62□□□□□ -0.07
NDUFA1O15239 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NDUFA1O15239 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.61□□□□□ -0.07
NDUFA1O15239 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.61□□□□□ -0.07
NDUFA1O15239 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
NDUFA1O15239 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.61□□□□□ -0.07
NDUFA1O15239 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.61□□□□□ -0.07
NDUFA1O15239 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.61□□□□□ -0.07
NDUFA1O15239 AF106564.1-201ENST00000607058 2553 ntBASIC14.61□□□□□ -0.07
NDUFA1O15239 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NDUFA1O15239 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
NDUFA1O15239 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NDUFA1O15239 AC021242.3-201ENST00000607598 1377 ntBASIC14.6□□□□□ -0.07
NDUFA1O15239 FP325331.1-202ENST00000623531 1380 ntBASIC14.6□□□□□ -0.07
NDUFA1O15239 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
NDUFA1O15239 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
NDUFA1O15239 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.6□□□□□ -0.07
NDUFA1O15239 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.6□□□□□ -0.07
NDUFA1O15239 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NDUFA1O15239 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NDUFA1O15239 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NDUFA1O15239 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms