Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 C17orf82-201ENST00000623772 1530 ntBASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 AC021242.3-201ENST00000607598 1377 ntBASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 AL499627.2-201ENST00000606283 725 ntBASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM56-RWDD3S4R434 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.58■□□□□ 0.41
TMEM56-RWDD3S4R434 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.58■□□□□ 0.41
TMEM56-RWDD3S4R434 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM56-RWDD3S4R434 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.58■□□□□ 0.41
TMEM56-RWDD3S4R434 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM56-RWDD3S4R434 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM56-RWDD3S4R434 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM56-RWDD3S4R434 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.58■□□□□ 0.41
TMEM56-RWDD3S4R434 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM56-RWDD3S4R434 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM56-RWDD3S4R434 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM56-RWDD3S4R434 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM56-RWDD3S4R434 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 AC079089.2-201ENST00000531211 1277 ntBASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 AC026471.6-201ENST00000622954 1905 ntBASIC17.57■□□□□ 0.4
TMEM56-RWDD3S4R434 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM56-RWDD3S4R434 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 YBX1P4-201ENST00000392794 808 ntBASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 AL031602.1-201ENST00000633169 911 ntBASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 OXCT2P1-201ENST00000447263 1535 ntBASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM56-RWDD3S4R434 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 780.5 ms