Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
PCDHAC2Q9Y5I4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.85■■□□□ 1.73
PCDHAC2Q9Y5I4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHAC2Q9Y5I4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHAC2Q9Y5I4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
PCDHAC2Q9Y5I4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHAC2Q9Y5I4 AP004607.7-201ENST00000527152 1677 ntBASIC25.84■■□□□ 1.73
PCDHAC2Q9Y5I4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHAC2Q9Y5I4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHAC2Q9Y5I4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHAC2Q9Y5I4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.84■■□□□ 1.73
PCDHAC2Q9Y5I4 KRT18P6-201ENST00000555540 1265 ntBASIC25.84■■□□□ 1.73
PCDHAC2Q9Y5I4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.84■■□□□ 1.73
PCDHAC2Q9Y5I4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHAC2Q9Y5I4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHAC2Q9Y5I4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHAC2Q9Y5I4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 LINC00526-201ENST00000581067 1875 ntBASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
PCDHAC2Q9Y5I4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 AC069152.1-201ENST00000438030 544 ntBASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHAC2Q9Y5I4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 AC010141.2-201ENST00000452426 721 ntBASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDHAC2Q9Y5I4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHAC2Q9Y5I4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDHAC2Q9Y5I4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHAC2Q9Y5I4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHAC2Q9Y5I4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHAC2Q9Y5I4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHAC2Q9Y5I4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC25.79■■□□□ 1.72
PCDHAC2Q9Y5I4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
PCDHAC2Q9Y5I4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHAC2Q9Y5I4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDHAC2Q9Y5I4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 AC010536.3-201ENST00000620306 533 ntBASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHAC2Q9Y5I4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHAC2Q9Y5I4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHAC2Q9Y5I4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDHAC2Q9Y5I4 AC105036.2-201ENST00000569468 176 ntBASIC25.77■■□□□ 1.72
PCDHAC2Q9Y5I4 AC138907.5-202ENST00000569484 235 ntBASIC25.77■■□□□ 1.72
PCDHAC2Q9Y5I4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHAC2Q9Y5I4 AC066615.1-201ENST00000640911 628 ntBASIC25.77■■□□□ 1.72
PCDHAC2Q9Y5I4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHAC2Q9Y5I4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHAC2Q9Y5I4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHAC2Q9Y5I4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDHAC2Q9Y5I4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms