Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 AC142381.4-202ENST00000563973 229 ntBASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 AC016405.3-201ENST00000607710 860 ntBASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 MYC-209ENST00000641252 345 ntBASIC23.68■■□□□ 1.38
TRIM43Q96BQ3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 BX276092.2-201ENST00000417668 665 ntBASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 AC007322.4-201ENST00000509611 723 ntBASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM43Q96BQ3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TRIM43Q96BQ3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM43Q96BQ3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.66■■□□□ 1.38
TRIM43Q96BQ3 AL512625.2-201ENST00000417533 625 ntBASIC23.66■■□□□ 1.38
TRIM43Q96BQ3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM43Q96BQ3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.66■■□□□ 1.38
TRIM43Q96BQ3 AC006058.3-201ENST00000606217 1069 ntBASIC23.66■■□□□ 1.38
TRIM43Q96BQ3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM43Q96BQ3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 AC128676.1-201ENST00000454392 318 ntBASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM43Q96BQ3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.64■■□□□ 1.38
TRIM43Q96BQ3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIM43Q96BQ3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM43Q96BQ3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM43Q96BQ3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
TRIM43Q96BQ3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.64■■□□□ 1.37
TRIM43Q96BQ3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIM43Q96BQ3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM43Q96BQ3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM43Q96BQ3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM43Q96BQ3 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM43Q96BQ3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 AC097658.1-201ENST00000475555 843 ntBASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM43Q96BQ3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TRIM43Q96BQ3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43Q96BQ3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43Q96BQ3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43Q96BQ3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43Q96BQ3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM43Q96BQ3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.62■■□□□ 1.37
TRIM43Q96BQ3 AC008694.1-202ENST00000636953 945 ntBASIC23.62■■□□□ 1.37
TRIM43Q96BQ3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM43Q96BQ3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIM43Q96BQ3 AC142381.3-201ENST00000568208 1670 ntBASIC23.6■■□□□ 1.37
TRIM43Q96BQ3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.6■■□□□ 1.37
TRIM43Q96BQ3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43Q96BQ3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43Q96BQ3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43Q96BQ3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM43Q96BQ3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
TRIM43Q96BQ3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms