Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.52■■□□□ 1.03
HMGCLP35914 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.52■■□□□ 1.03
HMGCLP35914 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLP35914 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HMGCLP35914 BX005040.4-201ENST00000637145 1518 ntBASIC21.51■■□□□ 1.03
HMGCLP35914 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLP35914 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLP35914 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.51■■□□□ 1.03
HMGCLP35914 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLP35914 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.51■■□□□ 1.03
HMGCLP35914 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.51■■□□□ 1.03
HMGCLP35914 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.51■■□□□ 1.03
HMGCLP35914 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.51■■□□□ 1.03
HMGCLP35914 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLP35914 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLP35914 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLP35914 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.5■■□□□ 1.03
HMGCLP35914 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLP35914 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.5■■□□□ 1.03
HMGCLP35914 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.5■■□□□ 1.03
HMGCLP35914 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.5■■□□□ 1.03
HMGCLP35914 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HMGCLP35914 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLP35914 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLP35914 AC019069.1-201ENST00000610008 1333 ntBASIC21.5■■□□□ 1.03
HMGCLP35914 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLP35914 C11orf96-202ENST00000528572 1834 ntBASIC21.5■■□□□ 1.03
HMGCLP35914 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLP35914 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLP35914 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HMGCLP35914 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.49■■□□□ 1.03
HMGCLP35914 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.49■■□□□ 1.03
HMGCLP35914 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.49■■□□□ 1.03
HMGCLP35914 AC079834.2-201ENST00000609776 1949 ntBASIC21.49■■□□□ 1.03
HMGCLP35914 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HMGCLP35914 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCLP35914 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.49■■□□□ 1.03
HMGCLP35914 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCLP35914 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.49■■□□□ 1.03
HMGCLP35914 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCLP35914 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.48■■□□□ 1.03
HMGCLP35914 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
HMGCLP35914 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.48■■□□□ 1.03
HMGCLP35914 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.48■■□□□ 1.03
HMGCLP35914 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
HMGCLP35914 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HMGCLP35914 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.47■■□□□ 1.03
HMGCLP35914 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 AC009237.3-201ENST00000393279 1427 ntBASIC21.47■■□□□ 1.03
HMGCLP35914 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.47■■□□□ 1.03
HMGCLP35914 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HMGCLP35914 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
HMGCLP35914 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.47■■□□□ 1.03
HMGCLP35914 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HMGCLP35914 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.47■■□□□ 1.03
HMGCLP35914 AC027612.3-201ENST00000413684 1047 ntBASIC21.47■■□□□ 1.03
HMGCLP35914 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.47■■□□□ 1.03
HMGCLP35914 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HMGCLP35914 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HMGCLP35914 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.46■■□□□ 1.03
HMGCLP35914 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.46■■□□□ 1.03
HMGCLP35914 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.46■■□□□ 1.03
HMGCLP35914 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.46■■□□□ 1.03
HMGCLP35914 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 FAM99A-202ENST00000538190 1989 ntBASIC21.46■■□□□ 1.03
HMGCLP35914 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
HMGCLP35914 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HMGCLP35914 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
HMGCLP35914 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms