Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDHGA8Q9Y5G5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PCDHGA8Q9Y5G5 HLA-L-209ENST00000420110 1011 ntBASIC21.17■□□□□ 0.98
PCDHGA8Q9Y5G5 AC006015.1-201ENST00000429970 570 ntBASIC21.17■□□□□ 0.98
PCDHGA8Q9Y5G5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.17■□□□□ 0.98
PCDHGA8Q9Y5G5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCDHGA8Q9Y5G5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDHGA8Q9Y5G5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGA8Q9Y5G5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGA8Q9Y5G5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGA8Q9Y5G5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 LINC00526-201ENST00000581067 1875 ntBASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGA8Q9Y5G5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 AC080038.1-201ENST00000611274 1154 ntBASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGA8Q9Y5G5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PCDHGA8Q9Y5G5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDHGA8Q9Y5G5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGA8Q9Y5G5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 ANOS2P-203ENST00000472227 1816 ntBASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDHGA8Q9Y5G5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 LINC01529-204ENST00000636474 1715 ntBASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 GUSBP5-202ENST00000510805 1989 ntBASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDHGA8Q9Y5G5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 DUSP8P3-201ENST00000399571 1760 ntBASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHGA8Q9Y5G5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms