Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CSNK1G1Q9HCP0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CSNK1G1Q9HCP0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CSNK1G1Q9HCP0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CSNK1G1Q9HCP0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G1Q9HCP0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G1Q9HCP0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.72■■□□□ 1.23
CSNK1G1Q9HCP0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G1Q9HCP0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G1Q9HCP0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G1Q9HCP0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G1Q9HCP0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.72■■□□□ 1.23
CSNK1G1Q9HCP0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CSNK1G1Q9HCP0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.72■■□□□ 1.23
CSNK1G1Q9HCP0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 AC080038.3-201ENST00000623346 1952 ntBASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 AL034346.1-201ENST00000568244 1277 ntBASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CSNK1G1Q9HCP0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
CSNK1G1Q9HCP0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 KRT18P5-201ENST00000436075 1291 ntBASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CSNK1G1Q9HCP0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 AC055733.4-201ENST00000638462 1354 ntBASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.69■■□□□ 1.22
CSNK1G1Q9HCP0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CSNK1G1Q9HCP0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CSNK1G1Q9HCP0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.66■■□□□ 1.22
CSNK1G1Q9HCP0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSNK1G1Q9HCP0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CSNK1G1Q9HCP0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSNK1G1Q9HCP0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CSNK1G1Q9HCP0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.66■■□□□ 1.22
CSNK1G1Q9HCP0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.66■■□□□ 1.22
CSNK1G1Q9HCP0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms