Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 YBX1P1-201ENST00000445822 960 ntBASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 TPRG1LP1-201ENST00000598702 760 ntBASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01555Q8NAE3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 AC242852.2-201ENST00000615738 1807 ntBASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 AC097381.1-201ENST00000429019 1296 ntBASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 MIR6821-201ENST00000617625 74 ntBASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01555Q8NAE3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.84■□□□□ 0.93
LINC01555Q8NAE3 AP004607.7-201ENST00000527152 1677 ntBASIC20.83■□□□□ 0.93
LINC01555Q8NAE3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01555Q8NAE3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.83■□□□□ 0.93
LINC01555Q8NAE3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01555Q8NAE3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.83■□□□□ 0.93
LINC01555Q8NAE3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01555Q8NAE3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01555Q8NAE3 AC123595.1-201ENST00000440769 1046 ntBASIC20.83■□□□□ 0.93
LINC01555Q8NAE3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC01555Q8NAE3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.83■□□□□ 0.92
LINC01555Q8NAE3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.83■□□□□ 0.92
LINC01555Q8NAE3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC01555Q8NAE3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 AC087623.3-201ENST00000607047 1098 ntBASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01555Q8NAE3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.81■□□□□ 0.92
LINC01555Q8NAE3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.81■□□□□ 0.92
LINC01555Q8NAE3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LINC01555Q8NAE3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LINC01555Q8NAE3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LINC01555Q8NAE3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms