Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 LINC01960-201ENST00000563759 1884 ntBASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NIPAL1Q6NVV3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 AC010141.3-201ENST00000456659 717 ntBASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPAL1Q6NVV3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 ESRRAP2-201ENST00000418437 1549 ntBASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NIPAL1Q6NVV3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.72■□□□□ 0.91
NIPAL1Q6NVV3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NIPAL1Q6NVV3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.72■□□□□ 0.91
NIPAL1Q6NVV3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NIPAL1Q6NVV3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.72■□□□□ 0.91
NIPAL1Q6NVV3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.72■□□□□ 0.91
NIPAL1Q6NVV3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.72■□□□□ 0.91
NIPAL1Q6NVV3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NIPAL1Q6NVV3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NIPAL1Q6NVV3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NIPAL1Q6NVV3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NIPAL1Q6NVV3 RNF165-205ENST00000588679 2904 ntBASIC20.71■□□□□ 0.91
NIPAL1Q6NVV3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPAL1Q6NVV3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPAL1Q6NVV3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPAL1Q6NVV3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
NIPAL1Q6NVV3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.71■□□□□ 0.91
NIPAL1Q6NVV3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPAL1Q6NVV3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NIPAL1Q6NVV3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
NIPAL1Q6NVV3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 AC019069.1-201ENST00000610008 1333 ntBASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
NIPAL1Q6NVV3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPAL1Q6NVV3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPAL1Q6NVV3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.69■□□□□ 0.9
NIPAL1Q6NVV3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NIPAL1Q6NVV3 AL137060.1-201ENST00000618151 2648 ntBASIC20.69■□□□□ 0.9
NIPAL1Q6NVV3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPAL1Q6NVV3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.69■□□□□ 0.9
NIPAL1Q6NVV3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.69■□□□□ 0.9
NIPAL1Q6NVV3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.69■□□□□ 0.9
NIPAL1Q6NVV3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
NIPAL1Q6NVV3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 AC105265.2-201ENST00000467189 838 ntBASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 TSPY26P-201ENST00000476365 1326 ntBASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.68■□□□□ 0.9
NIPAL1Q6NVV3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
NIPAL1Q6NVV3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL1Q6NVV3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL1Q6NVV3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NIPAL1Q6NVV3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms