Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 TPRG1LP1-201ENST00000598702 760 ntBASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNAP47Q5SQN1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SNAP47Q5SQN1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNAP47Q5SQN1 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.95■□□□□ 0.94
SNAP47Q5SQN1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNAP47Q5SQN1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.95■□□□□ 0.94
SNAP47Q5SQN1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.95■□□□□ 0.94
SNAP47Q5SQN1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SNAP47Q5SQN1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.95■□□□□ 0.94
SNAP47Q5SQN1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SNAP47Q5SQN1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNAP47Q5SQN1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.94■□□□□ 0.94
SNAP47Q5SQN1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 AC092068.2-201ENST00000590491 1708 ntBASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNAP47Q5SQN1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.92■□□□□ 0.94
SNAP47Q5SQN1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 AC016769.1-201ENST00000409132 1010 ntBASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 AC137761.2-201ENST00000561729 223 ntBASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 AC145350.3-201ENST00000569033 163 ntBASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 KRT18P61-201ENST00000585825 1298 ntBASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNAP47Q5SQN1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 AC004854.2-201ENST00000608450 1441 ntBASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SNAP47Q5SQN1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms