Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LDB2O43679 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LDB2O43679 MIR638-201ENST00000385237 100 ntBASIC21.68■■□□□ 1.06
LDB2O43679 AC099791.1-201ENST00000416440 715 ntBASIC21.68■■□□□ 1.06
LDB2O43679 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.68■■□□□ 1.06
LDB2O43679 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LDB2O43679 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LDB2O43679 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LDB2O43679 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.68■■□□□ 1.06
LDB2O43679 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
LDB2O43679 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LDB2O43679 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LDB2O43679 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.67■■□□□ 1.06
LDB2O43679 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
LDB2O43679 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LDB2O43679 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.67■■□□□ 1.06
LDB2O43679 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.67■■□□□ 1.06
LDB2O43679 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LDB2O43679 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LDB2O43679 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LDB2O43679 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.67■■□□□ 1.06
LDB2O43679 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LDB2O43679 MIR939-201ENST00000401314 82 ntBASIC21.67■■□□□ 1.06
LDB2O43679 AC027682.1-201ENST00000562846 899 ntBASIC21.67■■□□□ 1.06
LDB2O43679 AC126544.1-201ENST00000580842 1059 ntBASIC21.67■■□□□ 1.06
LDB2O43679 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.67■■□□□ 1.06
LDB2O43679 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.67■■□□□ 1.06
LDB2O43679 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LDB2O43679 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LDB2O43679 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.67■■□□□ 1.06
LDB2O43679 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LDB2O43679 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.67■■□□□ 1.06
LDB2O43679 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LDB2O43679 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
LDB2O43679 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.66■■□□□ 1.06
LDB2O43679 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
LDB2O43679 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LDB2O43679 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LDB2O43679 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.66■■□□□ 1.06
LDB2O43679 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LDB2O43679 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LDB2O43679 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
LDB2O43679 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LDB2O43679 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB2O43679 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB2O43679 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB2O43679 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LDB2O43679 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB2O43679 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LDB2O43679 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB2O43679 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB2O43679 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.65■■□□□ 1.06
LDB2O43679 SUDS3P1-201ENST00000505831 966 ntBASIC21.65■■□□□ 1.06
LDB2O43679 IGHV3-19-201ENST00000521488 291 ntBASIC21.65■■□□□ 1.06
LDB2O43679 AF213884.3-201ENST00000563833 479 ntBASIC21.65■■□□□ 1.06
LDB2O43679 AL136967.2-201ENST00000623968 743 ntBASIC21.65■■□□□ 1.06
LDB2O43679 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB2O43679 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LDB2O43679 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
LDB2O43679 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
LDB2O43679 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LDB2O43679 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LDB2O43679 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.64■■□□□ 1.06
LDB2O43679 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
LDB2O43679 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.64■■□□□ 1.06
LDB2O43679 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LDB2O43679 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LDB2O43679 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.64■■□□□ 1.05
LDB2O43679 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.64■■□□□ 1.05
LDB2O43679 FAM99A-202ENST00000538190 1989 ntBASIC21.64■■□□□ 1.05
LDB2O43679 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.64■■□□□ 1.05
LDB2O43679 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LDB2O43679 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LDB2O43679 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LDB2O43679 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
LDB2O43679 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LDB2O43679 RASA4CP-201ENST00000424092 1398 ntBASIC21.63■■□□□ 1.05
LDB2O43679 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LDB2O43679 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LDB2O43679 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LDB2O43679 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
LDB2O43679 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LDB2O43679 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LDB2O43679 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.62■■□□□ 1.05
LDB2O43679 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LDB2O43679 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LDB2O43679 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.62■■□□□ 1.05
LDB2O43679 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.62■■□□□ 1.05
LDB2O43679 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.62■■□□□ 1.05
LDB2O43679 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.62■■□□□ 1.05
LDB2O43679 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LDB2O43679 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LDB2O43679 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
LDB2O43679 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.62■■□□□ 1.05
LDB2O43679 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LDB2O43679 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LDB2O43679 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.61■■□□□ 1.05
LDB2O43679 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LDB2O43679 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.61■■□□□ 1.05
LDB2O43679 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms