Protein–RNA interactions for Protein: Q9H3N8

HRH4, Histamine H4 receptor, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH4Q9H3N8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
HRH4Q9H3N8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HRH4Q9H3N8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
HRH4Q9H3N8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HRH4Q9H3N8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HRH4Q9H3N8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HRH4Q9H3N8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HRH4Q9H3N8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HRH4Q9H3N8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.05■■□□□ 1.12
HRH4Q9H3N8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
HRH4Q9H3N8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HRH4Q9H3N8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HRH4Q9H3N8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HRH4Q9H3N8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HRH4Q9H3N8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.03■■□□□ 1.12
HRH4Q9H3N8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HRH4Q9H3N8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HRH4Q9H3N8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HRH4Q9H3N8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HRH4Q9H3N8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HRH4Q9H3N8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HRH4Q9H3N8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
HRH4Q9H3N8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
HRH4Q9H3N8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HRH4Q9H3N8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22■■□□□ 1.11
HRH4Q9H3N8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HRH4Q9H3N8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HRH4Q9H3N8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
HRH4Q9H3N8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HRH4Q9H3N8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HRH4Q9H3N8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
HRH4Q9H3N8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HRH4Q9H3N8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.97■■□□□ 1.11
HRH4Q9H3N8 AC135731.1-201ENST00000569415 2548 ntBASIC21.97■■□□□ 1.11
HRH4Q9H3N8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HRH4Q9H3N8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.96■■□□□ 1.11
HRH4Q9H3N8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HRH4Q9H3N8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
HRH4Q9H3N8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.95■■□□□ 1.1
HRH4Q9H3N8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.95■■□□□ 1.1
HRH4Q9H3N8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HRH4Q9H3N8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
HRH4Q9H3N8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
HRH4Q9H3N8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.94■■□□□ 1.1
HRH4Q9H3N8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
HRH4Q9H3N8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.93■■□□□ 1.1
HRH4Q9H3N8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HRH4Q9H3N8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HRH4Q9H3N8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
HRH4Q9H3N8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.91■■□□□ 1.1
HRH4Q9H3N8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HRH4Q9H3N8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HRH4Q9H3N8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HRH4Q9H3N8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HRH4Q9H3N8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HRH4Q9H3N8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HRH4Q9H3N8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HRH4Q9H3N8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HRH4Q9H3N8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HRH4Q9H3N8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
HRH4Q9H3N8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.83■■□□□ 1.09
HRH4Q9H3N8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HRH4Q9H3N8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HRH4Q9H3N8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HRH4Q9H3N8 AC120057.4-201ENST00000624722 1615 ntBASIC21.82■■□□□ 1.08
HRH4Q9H3N8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HRH4Q9H3N8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.81■■□□□ 1.08
HRH4Q9H3N8 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.81■■□□□ 1.08
HRH4Q9H3N8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HRH4Q9H3N8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HRH4Q9H3N8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HRH4Q9H3N8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HRH4Q9H3N8 AC015813.7-201ENST00000623294 581 ntBASIC21.8■■□□□ 1.08
HRH4Q9H3N8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
HRH4Q9H3N8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.79■■□□□ 1.08
HRH4Q9H3N8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HRH4Q9H3N8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
HRH4Q9H3N8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HRH4Q9H3N8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HRH4Q9H3N8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HRH4Q9H3N8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HRH4Q9H3N8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HRH4Q9H3N8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HRH4Q9H3N8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HRH4Q9H3N8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HRH4Q9H3N8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HRH4Q9H3N8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HRH4Q9H3N8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.75■■□□□ 1.07
HRH4Q9H3N8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HRH4Q9H3N8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.75■■□□□ 1.07
HRH4Q9H3N8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
HRH4Q9H3N8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HRH4Q9H3N8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HRH4Q9H3N8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.72■■□□□ 1.07
HRH4Q9H3N8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HRH4Q9H3N8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.71■■□□□ 1.07
HRH4Q9H3N8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HRH4Q9H3N8 AC142086.6-201ENST00000621154 1765 ntBASIC21.7■■□□□ 1.06
HRH4Q9H3N8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HRH4Q9H3N8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms