Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00528Q8N1L1 CAHM-201ENST00000604200 896 ntBASIC17.62■□□□□ 0.41
LINC00528Q8N1L1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00528Q8N1L1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LINC00528Q8N1L1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00528Q8N1L1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00528Q8N1L1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00528Q8N1L1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC17.61■□□□□ 0.41
LINC00528Q8N1L1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00528Q8N1L1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00528Q8N1L1 AL162393.1-201ENST00000437852 946 ntBASIC17.59■□□□□ 0.41
LINC00528Q8N1L1 AP006261.1-201ENST00000584783 668 ntBASIC17.59■□□□□ 0.41
LINC00528Q8N1L1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00528Q8N1L1 AL391121.1-201ENST00000607967 1349 ntBASIC17.58■□□□□ 0.4
LINC00528Q8N1L1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LINC00528Q8N1L1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.58■□□□□ 0.4
LINC00528Q8N1L1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00528Q8N1L1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00528Q8N1L1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00528Q8N1L1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LINC00528Q8N1L1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC00528Q8N1L1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC00528Q8N1L1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00528Q8N1L1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00528Q8N1L1 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00528Q8N1L1 AL133380.1-201ENST00000506013 324 ntBASIC17.54■□□□□ 0.4
LINC00528Q8N1L1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC00528Q8N1L1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC00528Q8N1L1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC17.53■□□□□ 0.4
LINC00528Q8N1L1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC17.52■□□□□ 0.4
LINC00528Q8N1L1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LINC00528Q8N1L1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00528Q8N1L1 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00528Q8N1L1 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.51■□□□□ 0.39
LINC00528Q8N1L1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.51■□□□□ 0.39
LINC00528Q8N1L1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC17.51■□□□□ 0.39
LINC00528Q8N1L1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LINC00528Q8N1L1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00528Q8N1L1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00528Q8N1L1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00528Q8N1L1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00528Q8N1L1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LINC00528Q8N1L1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00528Q8N1L1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LINC00528Q8N1L1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.48■□□□□ 0.39
LINC00528Q8N1L1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00528Q8N1L1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC00528Q8N1L1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.47■□□□□ 0.39
LINC00528Q8N1L1 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC00528Q8N1L1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LINC00528Q8N1L1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC00528Q8N1L1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.46■□□□□ 0.39
LINC00528Q8N1L1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00528Q8N1L1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00528Q8N1L1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC00528Q8N1L1 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00528Q8N1L1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00528Q8N1L1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC00528Q8N1L1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC00528Q8N1L1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.44■□□□□ 0.38
LINC00528Q8N1L1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC00528Q8N1L1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00528Q8N1L1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC00528Q8N1L1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00528Q8N1L1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00528Q8N1L1 MIR3665-201ENST00000578708 105 ntBASIC17.42■□□□□ 0.38
LINC00528Q8N1L1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC00528Q8N1L1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00528Q8N1L1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00528Q8N1L1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC00528Q8N1L1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
LINC00528Q8N1L1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC00528Q8N1L1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC00528Q8N1L1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LINC00528Q8N1L1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LINC00528Q8N1L1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.38■□□□□ 0.37
LINC00528Q8N1L1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LINC00528Q8N1L1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LINC00528Q8N1L1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00528Q8N1L1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LINC00528Q8N1L1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC17.35■□□□□ 0.37
LINC00528Q8N1L1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00528Q8N1L1 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC17.35■□□□□ 0.37
LINC00528Q8N1L1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
LINC00528Q8N1L1 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC17.35■□□□□ 0.37
LINC00528Q8N1L1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC00528Q8N1L1 ABCB10P1-201ENST00000614297 2181 ntBASIC17.35■□□□□ 0.37
LINC00528Q8N1L1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC00528Q8N1L1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.34■□□□□ 0.37
LINC00528Q8N1L1 MIR7108-201ENST00000614319 87 ntBASIC17.34■□□□□ 0.37
LINC00528Q8N1L1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC17.33■□□□□ 0.37
LINC00528Q8N1L1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LINC00528Q8N1L1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00528Q8N1L1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00528Q8N1L1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00528Q8N1L1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC00528Q8N1L1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC00528Q8N1L1 AC087741.3-201ENST00000624270 1347 ntBASIC17.31■□□□□ 0.36
LINC00528Q8N1L1 ABHD17AP4-201ENST00000411545 909 ntBASIC17.31■□□□□ 0.36
LINC00528Q8N1L1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms