Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.4■■■□□ 2.78
LBX1P52954 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.4■■■□□ 2.78
LBX1P52954 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.4■■■□□ 2.78
LBX1P52954 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
LBX1P52954 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
LBX1P52954 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.38■■■□□ 2.77
LBX1P52954 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.38■■■□□ 2.77
LBX1P52954 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.38■■■□□ 2.77
LBX1P52954 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.36■■■□□ 2.77
LBX1P52954 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
LBX1P52954 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.31■■■□□ 2.76
LBX1P52954 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
LBX1P52954 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.3■■■□□ 2.76
LBX1P52954 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.29■■■□□ 2.76
LBX1P52954 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.28■■■□□ 2.76
LBX1P52954 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
LBX1P52954 AC021231.2-201ENST00000594613 730 ntBASIC32.27■■■□□ 2.76
LBX1P52954 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.27■■■□□ 2.76
LBX1P52954 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
LBX1P52954 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.26■■■□□ 2.75
LBX1P52954 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.24■■■□□ 2.75
LBX1P52954 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC32.23■■■□□ 2.75
LBX1P52954 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
LBX1P52954 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.22■■■□□ 2.75
LBX1P52954 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
LBX1P52954 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.19■■■□□ 2.74
LBX1P52954 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
LBX1P52954 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
LBX1P52954 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
LBX1P52954 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
LBX1P52954 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
LBX1P52954 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.14■■■□□ 2.74
LBX1P52954 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
LBX1P52954 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
LBX1P52954 CR559946.2-201ENST00000623684 991 ntBASIC32.14■■■□□ 2.74
LBX1P52954 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.14■■■□□ 2.74
LBX1P52954 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
LBX1P52954 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
LBX1P52954 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
LBX1P52954 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.13■■■□□ 2.73
LBX1P52954 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
LBX1P52954 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LBX1P52954 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.11■■■□□ 2.73
LBX1P52954 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LBX1P52954 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
LBX1P52954 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
LBX1P52954 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
LBX1P52954 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.07■■■□□ 2.72
LBX1P52954 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
LBX1P52954 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
LBX1P52954 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
LBX1P52954 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
LBX1P52954 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.06■■■□□ 2.72
LBX1P52954 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.06■■■□□ 2.72
LBX1P52954 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
LBX1P52954 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.04■■■□□ 2.72
LBX1P52954 DUX4L11-201ENST00000611504 1267 ntBASIC32.04■■■□□ 2.72
LBX1P52954 DUX4L12-201ENST00000614593 1267 ntBASIC32.04■■■□□ 2.72
LBX1P52954 DUX4L14-201ENST00000621227 1267 ntBASIC32.04■■■□□ 2.72
LBX1P52954 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC32.03■■■□□ 2.72
LBX1P52954 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
LBX1P52954 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
LBX1P52954 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.02■■■□□ 2.72
LBX1P52954 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32■■■□□ 2.71
LBX1P52954 ABHD17AP5-201ENST00000580133 923 ntBASIC31.99■■■□□ 2.71
LBX1P52954 RARRES2P2-201ENST00000394842 485 ntBASIC31.96■■■□□ 2.71
LBX1P52954 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
LBX1P52954 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LBX1P52954 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.9■■■□□ 2.7
LBX1P52954 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
LBX1P52954 LINC01971-201ENST00000617888 1048 ntBASIC31.9■■■□□ 2.7
LBX1P52954 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.87■■■□□ 2.69
LBX1P52954 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
LBX1P52954 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.86■■■□□ 2.69
LBX1P52954 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.85■■■□□ 2.69
LBX1P52954 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.84■■■□□ 2.69
LBX1P52954 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
LBX1P52954 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.84■■■□□ 2.69
LBX1P52954 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
LBX1P52954 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.83■■■□□ 2.69
LBX1P52954 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
LBX1P52954 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.8■■■□□ 2.68
LBX1P52954 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
LBX1P52954 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.79■■■□□ 2.68
LBX1P52954 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
LBX1P52954 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
LBX1P52954 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
LBX1P52954 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
LBX1P52954 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.73■■■□□ 2.67
LBX1P52954 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
LBX1P52954 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.73■■■□□ 2.67
LBX1P52954 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
LBX1P52954 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
LBX1P52954 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
LBX1P52954 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
LBX1P52954 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
LBX1P52954 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.67■■■□□ 2.66
LBX1P52954 MIR6090-201ENST00000622481 60 ntBASIC31.67■■■□□ 2.66
LBX1P52954 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
LBX1P52954 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms