Protein–RNA interactions for Protein: P03901

MT-ND4L, NADH-ubiquinone oxidoreductase chain 4L, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4LP03901 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MT-ND4LP03901 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MT-ND4LP03901 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MT-ND4LP03901 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.48■■□□□ 1.03
MT-ND4LP03901 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
MT-ND4LP03901 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.47■■□□□ 1.03
MT-ND4LP03901 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MT-ND4LP03901 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MT-ND4LP03901 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MT-ND4LP03901 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MT-ND4LP03901 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
MT-ND4LP03901 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MT-ND4LP03901 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
MT-ND4LP03901 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MT-ND4LP03901 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
MT-ND4LP03901 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
MT-ND4LP03901 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.42■■□□□ 1.02
MT-ND4LP03901 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND4LP03901 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND4LP03901 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.4■■□□□ 1.02
MT-ND4LP03901 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND4LP03901 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND4LP03901 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND4LP03901 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND4LP03901 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND4LP03901 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND4LP03901 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.39■■□□□ 1.01
MT-ND4LP03901 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND4LP03901 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND4LP03901 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND4LP03901 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.36■■□□□ 1.01
MT-ND4LP03901 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.36■■□□□ 1.01
MT-ND4LP03901 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND4LP03901 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
MT-ND4LP03901 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND4LP03901 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
MT-ND4LP03901 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MT-ND4LP03901 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MT-ND4LP03901 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.32■■□□□ 1
MT-ND4LP03901 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.32■■□□□ 1
MT-ND4LP03901 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MT-ND4LP03901 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.31■■□□□ 1
MT-ND4LP03901 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC21.31■■□□□ 1
MT-ND4LP03901 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MT-ND4LP03901 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MT-ND4LP03901 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MT-ND4LP03901 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MT-ND4LP03901 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.29■■□□□ 1
MT-ND4LP03901 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MT-ND4LP03901 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
MT-ND4LP03901 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.29■■□□□ 1
MT-ND4LP03901 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MT-ND4LP03901 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.28■■□□□ 1
MT-ND4LP03901 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.27■■□□□ 1
MT-ND4LP03901 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MT-ND4LP03901 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MT-ND4LP03901 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.27■■□□□ 1
MT-ND4LP03901 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
MT-ND4LP03901 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
MT-ND4LP03901 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND4LP03901 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND4LP03901 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND4LP03901 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND4LP03901 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND4LP03901 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND4LP03901 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND4LP03901 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND4LP03901 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MT-ND4LP03901 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND4LP03901 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND4LP03901 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND4LP03901 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
MT-ND4LP03901 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.23■□□□□ 0.99
MT-ND4LP03901 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
MT-ND4LP03901 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.22■□□□□ 0.99
MT-ND4LP03901 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND4LP03901 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.22■□□□□ 0.99
MT-ND4LP03901 AC142086.6-201ENST00000621154 1765 ntBASIC21.22■□□□□ 0.99
MT-ND4LP03901 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MT-ND4LP03901 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
MT-ND4LP03901 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.2■□□□□ 0.98
MT-ND4LP03901 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MT-ND4LP03901 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.19■□□□□ 0.98
MT-ND4LP03901 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.18■□□□□ 0.98
MT-ND4LP03901 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MT-ND4LP03901 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
MT-ND4LP03901 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
MT-ND4LP03901 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND4LP03901 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MT-ND4LP03901 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
MT-ND4LP03901 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
MT-ND4LP03901 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MT-ND4LP03901 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND4LP03901 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
MT-ND4LP03901 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC21.13■□□□□ 0.97
MT-ND4LP03901 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.13■□□□□ 0.97
MT-ND4LP03901 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND4LP03901 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MT-ND4LP03901 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.11■□□□□ 0.97
MT-ND4LP03901 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms