Protein–RNA interactions for Protein: A6NJZ7

RIMBP3C, RIMS-binding protein 3C, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3CA6NJZ7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC45.68■■■■■ 4.9
RIMBP3CA6NJZ7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC45.67■■■■■ 4.9
RIMBP3CA6NJZ7 DUX4L29-201ENST00000425409 679 ntBASIC45.66■■■■■ 4.9
RIMBP3CA6NJZ7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC45.66■■■■■ 4.9
RIMBP3CA6NJZ7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC45.64■■■■■ 4.9
RIMBP3CA6NJZ7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC45.64■■■■■ 4.9
RIMBP3CA6NJZ7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC45.62■■■■■ 4.89
RIMBP3CA6NJZ7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC45.62■■■■■ 4.89
RIMBP3CA6NJZ7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC45.62■■■■■ 4.89
RIMBP3CA6NJZ7 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC45.59■■■■■ 4.89
RIMBP3CA6NJZ7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC45.59■■■■■ 4.89
RIMBP3CA6NJZ7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC45.58■■■■■ 4.89
RIMBP3CA6NJZ7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC45.55■■■■■ 4.88
RIMBP3CA6NJZ7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC45.55■■■■■ 4.88
RIMBP3CA6NJZ7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC45.54■■■■■ 4.88
RIMBP3CA6NJZ7 CR559946.2-201ENST00000623684 991 ntBASIC45.54■■■■■ 4.88
RIMBP3CA6NJZ7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC45.52■■■■■ 4.88
RIMBP3CA6NJZ7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC45.52■■■■■ 4.88
RIMBP3CA6NJZ7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC45.51■■■■■ 4.88
RIMBP3CA6NJZ7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC45.51■■■■■ 4.88
RIMBP3CA6NJZ7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC45.48■■■■■ 4.87
RIMBP3CA6NJZ7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC45.48■■■■■ 4.87
RIMBP3CA6NJZ7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC45.46■■■■■ 4.87
RIMBP3CA6NJZ7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC45.45■■■■■ 4.87
RIMBP3CA6NJZ7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC45.45■■■■■ 4.87
RIMBP3CA6NJZ7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC45.43■■■■■ 4.86
RIMBP3CA6NJZ7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC45.42■■■■■ 4.86
RIMBP3CA6NJZ7 AC021231.2-201ENST00000594613 730 ntBASIC45.41■■■■■ 4.86
RIMBP3CA6NJZ7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC45.4■■■■■ 4.86
RIMBP3CA6NJZ7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC45.39■■■■■ 4.86
RIMBP3CA6NJZ7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC45.39■■■■■ 4.86
RIMBP3CA6NJZ7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC45.39■■■■■ 4.86
RIMBP3CA6NJZ7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC45.37■■■■■ 4.85
RIMBP3CA6NJZ7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC45.37■■■■■ 4.85
RIMBP3CA6NJZ7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC45.37■■■■■ 4.85
RIMBP3CA6NJZ7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC45.37■■■■■ 4.85
RIMBP3CA6NJZ7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC45.36■■■■■ 4.85
RIMBP3CA6NJZ7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC45.35■■■■■ 4.85
RIMBP3CA6NJZ7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC45.34■■■■■ 4.85
RIMBP3CA6NJZ7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC45.33■■■■■ 4.85
RIMBP3CA6NJZ7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC45.32■■■■■ 4.85
RIMBP3CA6NJZ7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC45.3■■■■■ 4.84
RIMBP3CA6NJZ7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC45.3■■■■■ 4.84
RIMBP3CA6NJZ7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC45.29■■■■■ 4.84
RIMBP3CA6NJZ7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC45.29■■■■■ 4.84
RIMBP3CA6NJZ7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC45.27■■■■■ 4.84
RIMBP3CA6NJZ7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC45.26■■■■■ 4.84
RIMBP3CA6NJZ7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC45.26■■■■■ 4.84
RIMBP3CA6NJZ7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC45.25■■■■■ 4.83
RIMBP3CA6NJZ7 ABHD17AP5-201ENST00000580133 923 ntBASIC45.24■■■■■ 4.83
RIMBP3CA6NJZ7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC45.23■■■■■ 4.83
RIMBP3CA6NJZ7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC45.21■■■■■ 4.83
RIMBP3CA6NJZ7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC45.2■■■■■ 4.83
RIMBP3CA6NJZ7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC45.19■■■■■ 4.83
RIMBP3CA6NJZ7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC45.16■■■■■ 4.82
RIMBP3CA6NJZ7 RARRES2P2-201ENST00000394842 485 ntBASIC45.16■■■■■ 4.82
RIMBP3CA6NJZ7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC45.14■■■■■ 4.82
RIMBP3CA6NJZ7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC45.13■■■■■ 4.82
RIMBP3CA6NJZ7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC45.13■■■■■ 4.82
RIMBP3CA6NJZ7 DUX4L11-201ENST00000611504 1267 ntBASIC45.12■■■■■ 4.81
RIMBP3CA6NJZ7 DUX4L12-201ENST00000614593 1267 ntBASIC45.12■■■■■ 4.81
RIMBP3CA6NJZ7 DUX4L14-201ENST00000621227 1267 ntBASIC45.12■■■■■ 4.81
RIMBP3CA6NJZ7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC45.11■■■■■ 4.81
RIMBP3CA6NJZ7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC45.11■■■■■ 4.81
RIMBP3CA6NJZ7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC45.09■■■■■ 4.81
RIMBP3CA6NJZ7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC45.09■■■■■ 4.81
RIMBP3CA6NJZ7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC45.09■■■■■ 4.81
RIMBP3CA6NJZ7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC45.08■■■■■ 4.81
RIMBP3CA6NJZ7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC45.08■■■■■ 4.81
RIMBP3CA6NJZ7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC45.05■■■■■ 4.8
RIMBP3CA6NJZ7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC45.04■■■■■ 4.8
RIMBP3CA6NJZ7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC45.01■■■■■ 4.8
RIMBP3CA6NJZ7 LINC01971-201ENST00000617888 1048 ntBASIC44.98■■■■■ 4.79
RIMBP3CA6NJZ7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC44.97■■■■■ 4.79
RIMBP3CA6NJZ7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC44.97■■■■■ 4.79
RIMBP3CA6NJZ7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC44.97■■■■■ 4.79
RIMBP3CA6NJZ7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC44.94■■■■■ 4.79
RIMBP3CA6NJZ7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC44.94■■■■■ 4.79
RIMBP3CA6NJZ7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC44.91■■■■■ 4.78
RIMBP3CA6NJZ7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC44.9■■■■■ 4.78
RIMBP3CA6NJZ7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC44.87■■■■■ 4.77
RIMBP3CA6NJZ7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC44.86■■■■■ 4.77
RIMBP3CA6NJZ7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC44.86■■■■■ 4.77
RIMBP3CA6NJZ7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC44.84■■■■■ 4.77
RIMBP3CA6NJZ7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC44.83■■■■■ 4.77
RIMBP3CA6NJZ7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC44.8■■■■■ 4.76
RIMBP3CA6NJZ7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC44.76■■■■■ 4.76
RIMBP3CA6NJZ7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC44.76■■■■■ 4.76
RIMBP3CA6NJZ7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC44.75■■■■■ 4.75
RIMBP3CA6NJZ7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC44.75■■■■■ 4.75
RIMBP3CA6NJZ7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC44.75■■■■■ 4.75
RIMBP3CA6NJZ7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC44.75■■■■■ 4.75
RIMBP3CA6NJZ7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC44.74■■■■■ 4.75
RIMBP3CA6NJZ7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC44.72■■■■■ 4.75
RIMBP3CA6NJZ7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC44.71■■■■■ 4.75
RIMBP3CA6NJZ7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC44.71■■■■■ 4.75
RIMBP3CA6NJZ7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC44.69■■■■■ 4.75
RIMBP3CA6NJZ7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC44.69■■■■■ 4.74
RIMBP3CA6NJZ7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC44.69■■■■■ 4.74
RIMBP3CA6NJZ7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC44.69■■■■■ 4.74
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms