Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.462e-7■□□□□ 10.2
DDX52Q9Y2R4 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.022e-7■□□□□ 10.2
DDX52Q9Y2R4 ZNF706-208ENST00000519916 597 ntTSL 211.83□□□□□ -0.522e-7■□□□□ 10.2
DDX52Q9Y2R4 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.132e-7■□□□□ 10.2
DDX52Q9Y2R4 ZNF706-214ENST00000523146 476 ntTSL 52.48□□□□□ -2.012e-7■□□□□ 10.2
DDX52Q9Y2R4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.29■□□□□ 0.363e-6■□□□□ 10.1
DDX52Q9Y2R4 PPP2R5C-209ENST00000553890 492 ntTSL 313.68□□□□□ -0.224e-10■□□□□ 10.1
DDX52Q9Y2R4 PPP2R5C-213ENST00000554504 448 ntTSL 36.48□□□□□ -1.374e-10■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC33.47■■■□□ 2.953e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-206ENST00000537157 479 ntTSL 227.43■■□□□ 1.983e-7■□□□□ 10.1
DDX52Q9Y2R4 RHOF-207ENST00000546227 1219 ntTSL 525.66■■□□□ 1.73e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.96■■□□□ 1.593e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-201ENST00000428029 1024 ntTSL 222.73■■□□□ 1.233e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-210ENST00000543167 1059 ntTSL 220.59■□□□□ 0.893e-7■□□□□ 10.1
DDX52Q9Y2R4 RHOF-206ENST00000545544 826 ntTSL 519.75■□□□□ 0.753e-7■□□□□ 10.1
DDX52Q9Y2R4 RHOF-205ENST00000541657 1626 ntTSL 519.7■□□□□ 0.743e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.31■□□□□ 0.683e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-203ENST00000535614 480 ntTSL 419.01■□□□□ 0.633e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.35■□□□□ 0.533e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-208ENST00000541694 875 ntTSL 217.77■□□□□ 0.443e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC15.07■□□□□ 03e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-204ENST00000535643 1014 ntTSL 1 (best)12.9□□□□□ -0.343e-7■□□□□ 10.1
DDX52Q9Y2R4 LINC01089-212ENST00000545885 559 ntTSL 210.78□□□□□ -0.683e-7■□□□□ 10.1
DDX52Q9Y2R4 AC233280.19-201ENST00000633223 136 ntBASIC14.06□□□□□ -0.166e-7■□□□□ 10.1
DDX52Q9Y2R4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.623e-6■□□□□ 10.1
DDX52Q9Y2R4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.273e-6■□□□□ 10.1
DDX52Q9Y2R4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.56■■□□□ 1.043e-6■□□□□ 10.1
DDX52Q9Y2R4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.73e-6■□□□□ 10.1
DDX52Q9Y2R4 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.023e-6■□□□□ 10.1
DDX52Q9Y2R4 IQSEC1-205ENST00000618604 3744 ntTSL 1 (best) BASIC11.87□□□□□ -0.513e-6■□□□□ 10.1
DDX52Q9Y2R4 CPE-205ENST00000513982 564 ntTSL 49.43□□□□□ -0.93e-6■□□□□ 10.1
DDX52Q9Y2R4 CPE-204ENST00000511992 563 ntTSL 58.74□□□□□ -1.013e-6■□□□□ 10.1
DDX52Q9Y2R4 CPE-202ENST00000431967 633 ntTSL 48.52□□□□□ -1.053e-6■□□□□ 10.1
DDX52Q9Y2R4 HNRNPU-228ENST00000640306 2917 ntTSL 518.6■□□□□ 0.573e-7■□□□□ 10.1
DDX52Q9Y2R4 HNRNPU-217ENST00000638952 5678 ntTSL 517.69■□□□□ 0.423e-7■□□□□ 10.1
DDX52Q9Y2R4 HNRNPU-214ENST00000638475 2698 ntTSL 517.33■□□□□ 0.363e-7■□□□□ 10.1
DDX52Q9Y2R4 HNRNPU-229ENST00000640440 871 ntTSL 317.11■□□□□ 0.333e-7■□□□□ 10.1
DDX52Q9Y2R4 HNRNPU-209ENST00000476241 4844 ntTSL 516.99■□□□□ 0.313e-7■□□□□ 10.1
DDX52Q9Y2R4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.33e-7■□□□□ 10.1
DDX52Q9Y2R4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.253e-7■□□□□ 10.1
DDX52Q9Y2R4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 03e-7■□□□□ 10.1
DDX52Q9Y2R4 HNRNPU-224ENST00000640056 2045 ntTSL 511.08□□□□□ -0.643e-7■□□□□ 10.1
DDX52Q9Y2R4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.476e-6■□□□□ 10
DDX52Q9Y2R4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.026e-6■□□□□ 10
DDX52Q9Y2R4 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.096e-6■□□□□ 10
DDX52Q9Y2R4 SLC17A9-207ENST00000488738 3992 ntTSL 214.18□□□□□ -0.146e-6■□□□□ 10
DDX52Q9Y2R4 SORL1-209ENST00000530365 983 ntTSL 512.02□□□□□ -0.496e-6■□□□□ 10
DDX52Q9Y2R4 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.536e-6■□□□□ 10
DDX52Q9Y2R4 GPI-212ENST00000589985 1516 ntTSL 322.23■■□□□ 1.152e-17■□□□□ 10
DDX52Q9Y2R4 EZH2-210ENST00000498186 1876 ntTSL 228.75■■■□□ 2.191e-6■□□□□ 10
DDX52Q9Y2R4 EZH2-207ENST00000483012 1491 ntTSL 228.53■■■□□ 2.161e-6■□□□□ 10
DDX52Q9Y2R4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.47■■□□□ 1.991e-6■□□□□ 10
DDX52Q9Y2R4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.1■■□□□ 1.611e-6■□□□□ 10
DDX52Q9Y2R4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.031e-6■□□□□ 10
DDX52Q9Y2R4 EZH2-209ENST00000492143 3641 ntTSL 217.75■□□□□ 0.431e-6■□□□□ 10
DDX52Q9Y2R4 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.121e-6■□□□□ 10
DDX52Q9Y2R4 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.031e-6■□□□□ 10
DDX52Q9Y2R4 TRAP1-207ENST00000571804 781 ntTSL 527.45■■□□□ 1.984e-11■□□□□ 9.9
DDX52Q9Y2R4 TRAP1-215ENST00000576106 555 ntTSL 427.11■■□□□ 1.934e-11■□□□□ 9.9
DDX52Q9Y2R4 TRAP1-203ENST00000570403 521 ntTSL 426.99■■□□□ 1.914e-11■□□□□ 9.9
DDX52Q9Y2R4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.22■■□□□ 1.794e-11■□□□□ 9.9
DDX52Q9Y2R4 TRAP1-205ENST00000571011 480 ntTSL 525.28■■□□□ 1.644e-11■□□□□ 9.9
DDX52Q9Y2R4 TRAP1-211ENST00000574941 558 ntTSL 423.33■■□□□ 1.334e-11■□□□□ 9.9
DDX52Q9Y2R4 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.074e-11■□□□□ 9.9
DDX52Q9Y2R4 ANKRD9-203ENST00000559404 1502 ntTSL 229.84■■■□□ 2.373e-7■□□□□ 9.9
DDX52Q9Y2R4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.343e-7■□□□□ 9.9
DDX52Q9Y2R4 PPP1CB-208ENST00000455580 721 ntTSL 328.54■■■□□ 2.163e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 23e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 23e-7■□□□□ 9.9
DDX52Q9Y2R4 ANKRD9-202ENST00000557902 620 ntTSL 326.42■■□□□ 1.823e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.553e-7■□□□□ 9.9
DDX52Q9Y2R4 PPP1CB-205ENST00000420282 570 ntTSL 424.62■■□□□ 1.533e-7■□□□□ 9.9
DDX52Q9Y2R4 PPP1CB-206ENST00000427786 569 ntTSL 423.35■■□□□ 1.333e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-209ENST00000597793 1716 ntTSL 1 (best)22.8■■□□□ 1.243e-7■□□□□ 9.9
DDX52Q9Y2R4 DCAF6-206ENST00000455334 796 ntTSL 522.67■■□□□ 1.223e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-203ENST00000594165 986 ntTSL 322.63■■□□□ 1.213e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-213ENST00000600105 635 ntTSL 322.18■■□□□ 1.143e-7■□□□□ 9.9
DDX52Q9Y2R4 DCAF6-205ENST00000450548 724 ntTSL 321.81■■□□□ 1.083e-7■□□□□ 9.9
DDX52Q9Y2R4 TP73-AS1-210ENST00000637775 1455 ntBASIC21.13■□□□□ 0.972e-12■□□□□ 9.9
DDX52Q9Y2R4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.12■□□□□ 0.812e-12■□□□□ 9.9
DDX52Q9Y2R4 DCAF6-208ENST00000470721 2803 ntTSL 219.34■□□□□ 0.693e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.08■□□□□ 0.643e-7■□□□□ 9.9
DDX52Q9Y2R4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.543e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-210ENST00000598325 1438 ntTSL 518.26■□□□□ 0.513e-7■□□□□ 9.9
DDX52Q9Y2R4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.483e-7■□□□□ 9.9
DDX52Q9Y2R4 PPP1CB-207ENST00000441461 584 ntTSL 217.85■□□□□ 0.453e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.58■□□□□ 0.413e-7■□□□□ 9.9
DDX52Q9Y2R4 TP73-AS1-209ENST00000636630 2529 ntTSL 517.28■□□□□ 0.362e-12■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-202ENST00000594151 995 ntTSL 516.82■□□□□ 0.283e-7■□□□□ 9.9
DDX52Q9Y2R4 PPP1CB-209ENST00000464273 577 ntTSL 216.75■□□□□ 0.273e-7■□□□□ 9.9
DDX52Q9Y2R4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.173e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-218ENST00000601612 1480 ntTSL 215.97■□□□□ 0.153e-7■□□□□ 9.9
DDX52Q9Y2R4 TP73-AS1-204ENST00000452079 6358 ntTSL 1 (best)15.44■□□□□ 0.062e-12■□□□□ 9.9
DDX52Q9Y2R4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.062e-7■□□□□ 9.9
DDX52Q9Y2R4 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.023e-7■□□□□ 9.9
DDX52Q9Y2R4 PTOV1-215ENST00000600793 426 ntTSL 515.07■□□□□ 03e-7■□□□□ 9.9
DDX52Q9Y2R4 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.123e-7■□□□□ 9.9
DDX52Q9Y2R4 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.133e-7■□□□□ 9.9
DDX52Q9Y2R4 TP73-AS1-201ENST00000418088 3329 ntTSL 1 (best)14.05□□□□□ -0.162e-12■□□□□ 9.9
DDX52Q9Y2R4 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC13.92□□□□□ -0.183e-7■□□□□ 9.9
Retrieved 100 of 4,483 protein–RNA pairs in 212.2 ms