RNA–Protein interactions for RNA: ENST00000601612.5

PTOV1-218, Transcript of prostate tumor overexpressed 1, humanhuman

TSL 2

Gene PTOV1, Length 1,480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTOV1-218ENST00000601612 NISCHQ9Y2I1 1504 aa32.35■■■□□ 2.77
PTOV1-218ENST00000601612 CCDC180Q9P1Z9 1646 aa28.7■■■□□ 2.18
PTOV1-218ENST00000601612 ABCC9O60706 1549 aa27.83■■■□□ 2.05
PTOV1-218ENST00000601612 ZCCHC6Q5VYS8 1495 aaKnown RBP27■■□□□ 1.91
PTOV1-218ENST00000601612 NACADO15069 1562 aa26.94■■□□□ 1.9
PTOV1-218ENST00000601612 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
PTOV1-218ENST00000601612 MYO15BQ96JP2 1530 aa26.88■■□□□ 1.89
PTOV1-218ENST00000601612 DCAF8L2P0C7V8 631 aa26.87■■□□□ 1.89
PTOV1-218ENST00000601612 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
PTOV1-218ENST00000601612 UNC13AQ9UPW8 1703 aa26.23■■□□□ 1.79
PTOV1-218ENST00000601612 SCRIBQ14160 1630 aa26.14■■□□□ 1.77
PTOV1-218ENST00000601612 BICRAQ9NZM4 1560 aa26.05■■□□□ 1.76
PTOV1-218ENST00000601612 PABPN1Q86U42 306 aaKnown RBP eCLIP26.02■■□□□ 1.762e-6■■■□□ 16.9
PTOV1-218ENST00000601612 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
PTOV1-218ENST00000601612 EIF4G1Q04637 1599 aaKnown RBP25.37■■□□□ 1.65
PTOV1-218ENST00000601612 DNAJC5BQ9UF47 199 aa25.33■■□□□ 1.65
PTOV1-218ENST00000601612 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.62
PTOV1-218ENST00000601612 CECR2Q9BXF3 1484 aa25.14■■□□□ 1.62
PTOV1-218ENST00000601612 BAZ1AQ9NRL2 1556 aaPredicted RBP25.08■■□□□ 1.61
PTOV1-218ENST00000601612 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
PTOV1-218ENST00000601612 MROH2BQ7Z745 1585 aa24.9■■□□□ 1.58
PTOV1-218ENST00000601612 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
PTOV1-218ENST00000601612 ATAD2BQ9ULI0 1458 aa24.87■■□□□ 1.57
PTOV1-218ENST00000601612 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
PTOV1-218ENST00000601612 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
PTOV1-218ENST00000601612 HMGXB3Q12766 1538 aa24.76■■□□□ 1.55
PTOV1-218ENST00000601612 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
PTOV1-218ENST00000601612 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
PTOV1-218ENST00000601612 WIZO95785 1651 aa24.63■■□□□ 1.53
PTOV1-218ENST00000601612 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
PTOV1-218ENST00000601612 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
PTOV1-218ENST00000601612 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
PTOV1-218ENST00000601612 NESP48681 1621 aa24.13■■□□□ 1.45
PTOV1-218ENST00000601612 CADPSQ9ULU8 1353 aa24.13■■□□□ 1.45
PTOV1-218ENST00000601612 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
PTOV1-218ENST00000601612 CFTRP13569 1480 aa24.03■■□□□ 1.44
PTOV1-218ENST00000601612 ERCC6Q03468 1493 aa24■■□□□ 1.43
PTOV1-218ENST00000601612 PDS5BQ9NTI5 1447 aa24■■□□□ 1.43
PTOV1-218ENST00000601612 KIF21AQ7Z4S6 1674 aa23.85■■□□□ 1.41
PTOV1-218ENST00000601612 FANCD2Q9BXW9 1451 aa23.84■■□□□ 1.41
PTOV1-218ENST00000601612 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
PTOV1-218ENST00000601612 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
PTOV1-218ENST00000601612 THOC2Q8NI27 1593 aaKnown RBP23.76■■□□□ 1.39
PTOV1-218ENST00000601612 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
PTOV1-218ENST00000601612 CUX2O14529 1486 aa23.72■■□□□ 1.39
PTOV1-218ENST00000601612 WDR62O43379 1518 aa23.65■■□□□ 1.38
PTOV1-218ENST00000601612 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
PTOV1-218ENST00000601612 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
PTOV1-218ENST00000601612 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
PTOV1-218ENST00000601612 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
PTOV1-218ENST00000601612 CUX1P39880 1505 aa23.36■■□□□ 1.33
PTOV1-218ENST00000601612 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
PTOV1-218ENST00000601612 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.322e-6■■■□□ 16.7
PTOV1-218ENST00000601612 POLA1P09884 1462 aaPredicted RBP23.29■■□□□ 1.32
PTOV1-218ENST00000601612 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
PTOV1-218ENST00000601612 TOP2BQ02880 1626 aa23.24■■□□□ 1.31
PTOV1-218ENST00000601612 BIVM-ERCC5R4GMW8 1640 aa23.22■■□□□ 1.31
PTOV1-218ENST00000601612 SYNJ1O43426 1573 aa23.2■■□□□ 1.31
PTOV1-218ENST00000601612 TARBP1Q13395 1621 aaKnown RBP23.2■■□□□ 1.3
PTOV1-218ENST00000601612 SOGA1O94964 1423 aa23.19■■□□□ 1.3
PTOV1-218ENST00000601612 RAD54L2Q9Y4B4 1467 aa23.16■■□□□ 1.3
PTOV1-218ENST00000601612 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
PTOV1-218ENST00000601612 WDR97A6NE52 1622 aa23.09■■□□□ 1.29
PTOV1-218ENST00000601612 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
PTOV1-218ENST00000601612 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
PTOV1-218ENST00000601612 AQRO60306 1485 aaKnown RBP eCLIP23.03■■□□□ 1.285e-8■■■■■ 29.5
PTOV1-218ENST00000601612 TDRD9Q8NDG6 1382 aaKnown RBP23.02■■□□□ 1.28
PTOV1-218ENST00000601612 ABCA5Q8WWZ7 1642 aa22.94■■□□□ 1.26
PTOV1-218ENST00000601612 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
PTOV1-218ENST00000601612 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
PTOV1-218ENST00000601612 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
PTOV1-218ENST00000601612 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
PTOV1-218ENST00000601612 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
PTOV1-218ENST00000601612 SNAPC4Q5SXM2 1469 aa22.84■■□□□ 1.25
PTOV1-218ENST00000601612 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
PTOV1-218ENST00000601612 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
PTOV1-218ENST00000601612 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
PTOV1-218ENST00000601612 OSCARQ8IYS5 282 aa22.73■■□□□ 1.23
PTOV1-218ENST00000601612 DNAJC5Q9H3Z4 198 aa22.72■■□□□ 1.23
PTOV1-218ENST00000601612 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
PTOV1-218ENST00000601612 CHD1O14646 1710 aa22.71■■□□□ 1.23
PTOV1-218ENST00000601612 CHMP7Q8WUX9 453 aaPredicted RBP22.71■■□□□ 1.23
PTOV1-218ENST00000601612 FHAD1B1AJZ9 1412 aa22.7■■□□□ 1.22
PTOV1-218ENST00000601612 FBLN2P98095 1184 aa22.7■■□□□ 1.22
PTOV1-218ENST00000601612 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
PTOV1-218ENST00000601612 IGF1RP08069 1367 aa22.68■■□□□ 1.22
PTOV1-218ENST00000601612 CUL7Q14999 1698 aa22.63■■□□□ 1.21
PTOV1-218ENST00000601612 GRIN2AQ12879 1464 aa22.62■■□□□ 1.21
PTOV1-218ENST00000601612 RUSC2Q8N2Y8 1516 aa22.59■■□□□ 1.21
PTOV1-218ENST00000601612 CARMIL1Q5VZK9 1371 aa22.55■■□□□ 1.2
PTOV1-218ENST00000601612 EEA1Q15075 1411 aa22.54■■□□□ 1.2
PTOV1-218ENST00000601612 NUP160Q12769 1436 aa22.52■■□□□ 1.2
PTOV1-218ENST00000601612 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
PTOV1-218ENST00000601612 CEP170Q5SW79 1584 aa22.48■■□□□ 1.19
PTOV1-218ENST00000601612 RAPGEF2Q9Y4G8 1499 aa22.45■■□□□ 1.18
PTOV1-218ENST00000601612 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
PTOV1-218ENST00000601612 PRXQ9BXM0 1461 aa22.42■■□□□ 1.18
PTOV1-218ENST00000601612 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
PTOV1-218ENST00000601612 KIAA0586Q9BVV6 1533 aa22.36■■□□□ 1.17
PTOV1-218ENST00000601612 FAM9AQ8IZU1 332 aaPredicted RBP22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms