RNA–Protein interactions for RNA: ENST00000600603.5

PTOV1-214, Transcript of prostate tumor overexpressed 1, humanhuman

TSL 1 (best) BASIC

Gene PTOV1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTOV1-214ENST00000600603 NISCHQ9Y2I1 1504 aa35.55■■■■□ 3.28
PTOV1-214ENST00000600603 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
PTOV1-214ENST00000600603 ABCC9O60706 1549 aa30.51■■■□□ 2.47
PTOV1-214ENST00000600603 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.34
PTOV1-214ENST00000600603 DCAF8L2P0C7V8 631 aa29.48■■■□□ 2.31
PTOV1-214ENST00000600603 NACADO15069 1562 aa29.44■■■□□ 2.3
PTOV1-214ENST00000600603 DCAF1Q9Y4B6 1507 aa29.39■■■□□ 2.3
PTOV1-214ENST00000600603 RB1CC1Q8TDY2 1594 aa29.38■■■□□ 2.29
PTOV1-214ENST00000600603 MYO15BQ96JP2 1530 aa29.38■■■□□ 2.29
PTOV1-214ENST00000600603 UNC13AQ9UPW8 1703 aa28.82■■■□□ 2.2
PTOV1-214ENST00000600603 SCRIBQ14160 1630 aa28.74■■■□□ 2.19
PTOV1-214ENST00000600603 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
PTOV1-214ENST00000600603 PABPN1Q86U42 306 aaKnown RBP eCLIP28.58■■■□□ 2.172e-6■■■□□ 16.9
PTOV1-214ENST00000600603 SHROOM4Q9ULL8 1493 aa28.29■■■□□ 2.12
PTOV1-214ENST00000600603 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
PTOV1-214ENST00000600603 EIF4G1Q04637 1599 aaKnown RBP27.78■■■□□ 2.04
PTOV1-214ENST00000600603 CECR2Q9BXF3 1484 aa27.74■■■□□ 2.03
PTOV1-214ENST00000600603 CC2D2AQ9P2K1 1620 aa27.6■■■□□ 2.01
PTOV1-214ENST00000600603 SMARCA4P51532 1647 aa27.51■■□□□ 1.99
PTOV1-214ENST00000600603 BAZ1AQ9NRL2 1556 aaPredicted RBP27.47■■□□□ 1.99
PTOV1-214ENST00000600603 MROH2BQ7Z745 1585 aa27.46■■□□□ 1.99
PTOV1-214ENST00000600603 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
PTOV1-214ENST00000600603 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
PTOV1-214ENST00000600603 RSF1Q96T23 1441 aaPredicted RBP27.23■■□□□ 1.95
PTOV1-214ENST00000600603 NCAPD3P42695 1498 aa27.21■■□□□ 1.95
PTOV1-214ENST00000600603 SMARCA2P51531 1590 aa27.19■■□□□ 1.94
PTOV1-214ENST00000600603 WIZO95785 1651 aa27.15■■□□□ 1.94
PTOV1-214ENST00000600603 HMGXB3Q12766 1538 aa27.09■■□□□ 1.93
PTOV1-214ENST00000600603 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
PTOV1-214ENST00000600603 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.89
PTOV1-214ENST00000600603 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
PTOV1-214ENST00000600603 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
PTOV1-214ENST00000600603 NESP48681 1621 aa26.55■■□□□ 1.84
PTOV1-214ENST00000600603 CADPSQ9ULU8 1353 aa26.42■■□□□ 1.82
PTOV1-214ENST00000600603 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.81
PTOV1-214ENST00000600603 CFTRP13569 1480 aa26.36■■□□□ 1.81
PTOV1-214ENST00000600603 PDS5BQ9NTI5 1447 aa26.18■■□□□ 1.78
PTOV1-214ENST00000600603 KIF21AQ7Z4S6 1674 aa26.17■■□□□ 1.78
PTOV1-214ENST00000600603 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
PTOV1-214ENST00000600603 FANCD2Q9BXW9 1451 aa26.13■■□□□ 1.77
PTOV1-214ENST00000600603 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
PTOV1-214ENST00000600603 THOC2Q8NI27 1593 aaKnown RBP26.04■■□□□ 1.76
PTOV1-214ENST00000600603 CEP164Q9UPV0 1460 aa26.03■■□□□ 1.76
PTOV1-214ENST00000600603 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
PTOV1-214ENST00000600603 URB2Q14146 1524 aaKnown RBP25.91■■□□□ 1.74
PTOV1-214ENST00000600603 WDR62O43379 1518 aa25.88■■□□□ 1.73
PTOV1-214ENST00000600603 CUX2O14529 1486 aa25.79■■□□□ 1.72
PTOV1-214ENST00000600603 TOPBP1Q92547 1522 aa25.76■■□□□ 1.71
PTOV1-214ENST00000600603 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
PTOV1-214ENST00000600603 CUX1P39880 1505 aa25.73■■□□□ 1.71
PTOV1-214ENST00000600603 ABCC8Q09428 1581 aa25.71■■□□□ 1.71
PTOV1-214ENST00000600603 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
PTOV1-214ENST00000600603 WRNQ14191 1432 aaPredicted RBP eCLIP25.6■■□□□ 1.692e-6■■■□□ 16.7
PTOV1-214ENST00000600603 POLA1P09884 1462 aaPredicted RBP25.58■■□□□ 1.68
PTOV1-214ENST00000600603 FGD5Q6ZNL6 1462 aa25.55■■□□□ 1.68
PTOV1-214ENST00000600603 TOP2BQ02880 1626 aa25.53■■□□□ 1.68
PTOV1-214ENST00000600603 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
PTOV1-214ENST00000600603 RAD54L2Q9Y4B4 1467 aa25.5■■□□□ 1.67
PTOV1-214ENST00000600603 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
PTOV1-214ENST00000600603 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
PTOV1-214ENST00000600603 ZNF608Q9ULD9 1512 aaPredicted RBP25.44■■□□□ 1.66
PTOV1-214ENST00000600603 SOGA1O94964 1423 aa25.43■■□□□ 1.66
PTOV1-214ENST00000600603 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
PTOV1-214ENST00000600603 ABCA10Q8WWZ4 1543 aa25.31■■□□□ 1.64
PTOV1-214ENST00000600603 AQRO60306 1485 aaKnown RBP eCLIP25.31■■□□□ 1.645e-8■■■■■ 29.5
PTOV1-214ENST00000600603 TDRD9Q8NDG6 1382 aaKnown RBP25.3■■□□□ 1.64
PTOV1-214ENST00000600603 EIF4G3O43432 1585 aaKnown RBP25.29■■□□□ 1.64
PTOV1-214ENST00000600603 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
PTOV1-214ENST00000600603 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
PTOV1-214ENST00000600603 TRIM41Q8WV44 630 aa25.14■■□□□ 1.62
PTOV1-214ENST00000600603 GAPVD1Q14C86 1478 aa25.14■■□□□ 1.61
PTOV1-214ENST00000600603 GRIN2BQ13224 1484 aa25.08■■□□□ 1.61
PTOV1-214ENST00000600603 PBRM1Q86U86 1689 aa25.06■■□□□ 1.6
PTOV1-214ENST00000600603 SNAPC4Q5SXM2 1469 aa25.05■■□□□ 1.6
PTOV1-214ENST00000600603 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
PTOV1-214ENST00000600603 KIF27Q86VH2 1401 aa24.99■■□□□ 1.59
PTOV1-214ENST00000600603 MAGI1Q96QZ7 1491 aaPredicted RBP24.97■■□□□ 1.59
PTOV1-214ENST00000600603 ERICH3Q5RHP9 1530 aa24.97■■□□□ 1.59
PTOV1-214ENST00000600603 IGF1RP08069 1367 aa24.96■■□□□ 1.59
PTOV1-214ENST00000600603 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
PTOV1-214ENST00000600603 CHD1O14646 1710 aa24.9■■□□□ 1.58
PTOV1-214ENST00000600603 SYNJ2O15056 1496 aa24.89■■□□□ 1.57
PTOV1-214ENST00000600603 FHAD1B1AJZ9 1412 aa24.85■■□□□ 1.57
PTOV1-214ENST00000600603 FBLN2P98095 1184 aa24.83■■□□□ 1.57
PTOV1-214ENST00000600603 CHMP7Q8WUX9 453 aaPredicted RBP24.8■■□□□ 1.56
PTOV1-214ENST00000600603 DNAJC5Q9H3Z4 198 aa24.79■■□□□ 1.56
PTOV1-214ENST00000600603 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
PTOV1-214ENST00000600603 CUL7Q14999 1698 aa24.77■■□□□ 1.56
PTOV1-214ENST00000600603 OSCARQ8IYS5 282 aa24.77■■□□□ 1.56
PTOV1-214ENST00000600603 CARMIL1Q5VZK9 1371 aa24.76■■□□□ 1.55
PTOV1-214ENST00000600603 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
PTOV1-214ENST00000600603 NUP160Q12769 1436 aa24.7■■□□□ 1.54
PTOV1-214ENST00000600603 FAM9AQ8IZU1 332 aaPredicted RBP24.69■■□□□ 1.54
PTOV1-214ENST00000600603 EEA1Q15075 1411 aa24.69■■□□□ 1.54
PTOV1-214ENST00000600603 PRXQ9BXM0 1461 aa24.69■■□□□ 1.54
PTOV1-214ENST00000600603 CLASP1Q7Z460 1538 aa24.68■■□□□ 1.54
PTOV1-214ENST00000600603 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
PTOV1-214ENST00000600603 RAPGEF2Q9Y4G8 1499 aa24.63■■□□□ 1.53
PTOV1-214ENST00000600603 KIAA0586Q9BVV6 1533 aa24.48■■□□□ 1.51
PTOV1-214ENST00000600603 KIF21BO75037 1637 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms