RNA–Protein interactions for RNA: ENST00000546227.5

RHOF-207, Transcript of ras homolog family member F, filopodia associated, humanhuman

TSL 5

Gene RHOF, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOF-207ENST00000546227 NISCHQ9Y2I1 1504 aa54.41■■■■■ 6.3
RHOF-207ENST00000546227 ABCC9O60706 1549 aa48.96■■■■■ 5.43
RHOF-207ENST00000546227 CCDC180Q9P1Z9 1646 aa48.81■■■■■ 5.4
RHOF-207ENST00000546227 RB1CC1Q8TDY2 1594 aa46.51■■■■■ 5.04
RHOF-207ENST00000546227 NACADO15069 1562 aa46.18■■■■■ 4.98
RHOF-207ENST00000546227 DNAJC5BQ9UF47 199 aa46.01■■■■■ 4.96
RHOF-207ENST00000546227 DCAF8L2P0C7V8 631 aa45.96■■■■■ 4.95
RHOF-207ENST00000546227 PABPN1Q86U42 306 aaKnown RBP eCLIP45.58■■■■■ 4.895e-8■■■□□ 15.7
RHOF-207ENST00000546227 UNC13AQ9UPW8 1703 aa45.49■■■■■ 4.87
RHOF-207ENST00000546227 MYO15BQ96JP2 1530 aa45.49■■■■■ 4.87
RHOF-207ENST00000546227 BICRAQ9NZM4 1560 aa45.21■■■■■ 4.83
RHOF-207ENST00000546227 ZCCHC6Q5VYS8 1495 aaKnown RBP45.1■■■■■ 4.81
RHOF-207ENST00000546227 DCAF1Q9Y4B6 1507 aa44.91■■■■■ 4.78
RHOF-207ENST00000546227 SCRIBQ14160 1630 aa44.55■■■■■ 4.72
RHOF-207ENST00000546227 SHROOM4Q9ULL8 1493 aa44.51■■■■■ 4.72
RHOF-207ENST00000546227 CC2D2AQ9P2K1 1620 aa44.21■■■■■ 4.67
RHOF-207ENST00000546227 EIF4G1Q04637 1599 aaKnown RBP44.09■■■■■ 4.65
RHOF-207ENST00000546227 CECR2Q9BXF3 1484 aa44.08■■■■■ 4.65
RHOF-207ENST00000546227 NCAPD3P42695 1498 aa42.64■■■■■ 4.42
RHOF-207ENST00000546227 ATAD2BQ9ULI0 1458 aa42.54■■■■■ 4.4
RHOF-207ENST00000546227 SMARCA4P51532 1647 aa42.46■■■■■ 4.39
RHOF-207ENST00000546227 SMARCA2P51531 1590 aa42.36■■■■■ 4.37
RHOF-207ENST00000546227 HMGXB3Q12766 1538 aa42.31■■■■■ 4.36
RHOF-207ENST00000546227 ERCC6Q03468 1493 aa42.23■■■■■ 4.35
RHOF-207ENST00000546227 DNAJC5Q9H3Z4 198 aa42.23■■■■■ 4.35
RHOF-207ENST00000546227 BAZ1AQ9NRL2 1556 aaPredicted RBP42.22■■■■■ 4.35
RHOF-207ENST00000546227 CUX2O14529 1486 aa42.17■■■■■ 4.34
RHOF-207ENST00000546227 BAZ1BQ9UIG0 1483 aaKnown RBP42.1■■■■■ 4.33
RHOF-207ENST00000546227 NESP48681 1621 aa42.06■■■■■ 4.32
RHOF-207ENST00000546227 PEG3Q9GZU2 1588 aa42.03■■■■■ 4.32
RHOF-207ENST00000546227 MROH2BQ7Z745 1585 aa41.96■■■■■ 4.31
RHOF-207ENST00000546227 LAMC3Q9Y6N6 1575 aa41.67■■■■■ 4.26
RHOF-207ENST00000546227 THOC2Q8NI27 1593 aaKnown RBP41.62■■■■■ 4.25
RHOF-207ENST00000546227 KIF21AQ7Z4S6 1674 aa41.47■■■■■ 4.23
RHOF-207ENST00000546227 WIZO95785 1651 aa41.45■■■■■ 4.23
RHOF-207ENST00000546227 PDS5BQ9NTI5 1447 aa41.44■■■■■ 4.22
RHOF-207ENST00000546227 CADPSQ9ULU8 1353 aa41.35■■■■■ 4.21
RHOF-207ENST00000546227 MRC2Q9UBG0 1479 aa41.12■■■■■ 4.17
RHOF-207ENST00000546227 RSF1Q96T23 1441 aaPredicted RBP41.05■■■■■ 4.16
RHOF-207ENST00000546227 WDR62O43379 1518 aa41.03■■■■■ 4.16
RHOF-207ENST00000546227 CEP164Q9UPV0 1460 aa40.94■■■■■ 4.14
RHOF-207ENST00000546227 TOP2AP11388 1531 aaKnown RBP40.9■■■■■ 4.14
RHOF-207ENST00000546227 FANCD2Q9BXW9 1451 aa40.9■■■■■ 4.14
RHOF-207ENST00000546227 CFTRP13569 1480 aa40.87■■■■■ 4.13
RHOF-207ENST00000546227 URB2Q14146 1524 aaKnown RBP40.59■■■■■ 4.09
RHOF-207ENST00000546227 CCDC88BA6NC98 1476 aa40.45■■■■■ 4.07
RHOF-207ENST00000546227 PRDM2Q13029 1718 aa40.42■■■■■ 4.06
RHOF-207ENST00000546227 TRIM41Q8WV44 630 aa40.39■■■■■ 4.06
RHOF-207ENST00000546227 OSCARQ8IYS5 282 aa40.22■■■■■ 4.03
RHOF-207ENST00000546227 TOPBP1Q92547 1522 aa40.12■■■■■ 4.01
RHOF-207ENST00000546227 ZNF608Q9ULD9 1512 aaPredicted RBP40.11■■■■■ 4.01
RHOF-207ENST00000546227 IFT140Q96RY7 1462 aa40.11■■■■■ 4.01
RHOF-207ENST00000546227 ABCC8Q09428 1581 aa39.95■■■■□ 3.99
RHOF-207ENST00000546227 DNMBPQ6XZF7 1577 aa39.95■■■■□ 3.99
RHOF-207ENST00000546227 EIF4G3O43432 1585 aaKnown RBP39.86■■■■□ 3.97
RHOF-207ENST00000546227 TARBP1Q13395 1621 aaKnown RBP39.76■■■■□ 3.96
RHOF-207ENST00000546227 RIMBP3CA6NJZ7 1639 aa39.76■■■■□ 3.95
RHOF-207ENST00000546227 RIMBP3BA6NNM3 1639 aa39.76■■■■□ 3.95
RHOF-207ENST00000546227 RIMBP3Q9UFD9 1639 aa39.76■■■■□ 3.95
RHOF-207ENST00000546227 AQRO60306 1485 aaKnown RBP eCLIP39.72■■■■□ 3.953e-6■■■□□ 15.5
RHOF-207ENST00000546227 POLA1P09884 1462 aaPredicted RBP39.71■■■■□ 3.95
RHOF-207ENST00000546227 ARHGEF11O15085 1522 aa39.63■■■■□ 3.93
RHOF-207ENST00000546227 RAD54L2Q9Y4B4 1467 aa39.59■■■■□ 3.93
RHOF-207ENST00000546227 CHD1O14646 1710 aa39.57■■■■□ 3.92
RHOF-207ENST00000546227 SOGA1O94964 1423 aa39.51■■■■□ 3.92
RHOF-207ENST00000546227 TDRD9Q8NDG6 1382 aaKnown RBP39.46■■■■□ 3.91
RHOF-207ENST00000546227 FGD5Q6ZNL6 1462 aa39.46■■■■□ 3.91
RHOF-207ENST00000546227 FBLN2P98095 1184 aa39.44■■■■□ 3.9
RHOF-207ENST00000546227 CUX1P39880 1505 aa39.43■■■■□ 3.9
RHOF-207ENST00000546227 CYB5RLQ6IPT4 315 aa39.33■■■■□ 3.89
RHOF-207ENST00000546227 SNAPC4Q5SXM2 1469 aa39.32■■■■□ 3.89
RHOF-207ENST00000546227 WDR97A6NE52 1622 aa39.29■■■■□ 3.88
RHOF-207ENST00000546227 ARAP1Q96P48 1450 aa39.25■■■■□ 3.87
RHOF-207ENST00000546227 SUPT5HO00267 1087 aaKnown RBP39.19■■■■□ 3.86
RHOF-207ENST00000546227 GRIN2BQ13224 1484 aa39.17■■■■□ 3.86
RHOF-207ENST00000546227 MAGI1Q96QZ7 1491 aaPredicted RBP39.17■■■■□ 3.86
RHOF-207ENST00000546227 CHMP7Q8WUX9 453 aaPredicted RBP39.12■■■■□ 3.85
RHOF-207ENST00000546227 CLASP1Q7Z460 1538 aa39.12■■■■□ 3.85
RHOF-207ENST00000546227 SYNJ1O43426 1573 aa39.05■■■■□ 3.84
RHOF-207ENST00000546227 SYNJ2O15056 1496 aa39.05■■■■□ 3.84
RHOF-207ENST00000546227 GAPVD1Q14C86 1478 aa39.03■■■■□ 3.84
RHOF-207ENST00000546227 PBRM1Q86U86 1689 aa39.02■■■■□ 3.84
RHOF-207ENST00000546227 ABCA10Q8WWZ4 1543 aa38.99■■■■□ 3.83
RHOF-207ENST00000546227 ABCA5Q8WWZ7 1642 aa38.95■■■■□ 3.83
RHOF-207ENST00000546227 TRHP20396 242 aaPredicted RBP38.89■■■■□ 3.82
RHOF-207ENST00000546227 WRNQ14191 1432 aaPredicted RBP eCLIP38.8■■■■□ 3.8
RHOF-207ENST00000546227 BIVM-ERCC5R4GMW8 1640 aa38.74■■■■□ 3.79
RHOF-207ENST00000546227 TOP2BQ02880 1626 aa38.74■■■■□ 3.79
RHOF-207ENST00000546227 GRIN2AQ12879 1464 aa38.68■■■■□ 3.78
RHOF-207ENST00000546227 ADAMTS12P58397 1594 aa38.67■■■■□ 3.78
RHOF-207ENST00000546227 CEP170Q5SW79 1584 aa38.57■■■■□ 3.76
RHOF-207ENST00000546227 NUP160Q12769 1436 aa38.56■■■■□ 3.76
RHOF-207ENST00000546227 ERCC6L2Q5T890 1561 aa38.56■■■■□ 3.76
RHOF-207ENST00000546227 FHAD1B1AJZ9 1412 aa38.53■■■■□ 3.76
RHOF-207ENST00000546227 ERICH3Q5RHP9 1530 aa38.48■■■■□ 3.75
RHOF-207ENST00000546227 SHROOM2Q13796 1616 aa38.38■■■■□ 3.74
RHOF-207ENST00000546227 PRG4Q92954 1404 aaPredicted RBP38.18■■■■□ 3.7
RHOF-207ENST00000546227 JPH4Q96JJ6 628 aa38.14■■■■□ 3.7
RHOF-207ENST00000546227 RUSC2Q8N2Y8 1516 aa38.12■■■■□ 3.69
RHOF-207ENST00000546227 IGF1RP08069 1367 aa37.99■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms