RNA–Protein interactions for RNA: ENST00000246957.9

TRAP1-201, Transcript of TNF receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAP1, Length 2,296 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-201ENST00000246957 NISCHQ9Y2I1 1504 aa30.78■■■□□ 2.52
TRAP1-201ENST00000246957 CCDC180Q9P1Z9 1646 aa27■■□□□ 1.91
TRAP1-201ENST00000246957 ABCC9O60706 1549 aa26.25■■□□□ 1.79
TRAP1-201ENST00000246957 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
TRAP1-201ENST00000246957 ZCCHC6Q5VYS8 1495 aaKnown RBP25.75■■□□□ 1.71
TRAP1-201ENST00000246957 DCAF1Q9Y4B6 1507 aa25.26■■□□□ 1.63
TRAP1-201ENST00000246957 NACADO15069 1562 aa25.23■■□□□ 1.63
TRAP1-201ENST00000246957 RB1CC1Q8TDY2 1594 aa25.19■■□□□ 1.62
TRAP1-201ENST00000246957 MYO15BQ96JP2 1530 aa25.1■■□□□ 1.61
TRAP1-201ENST00000246957 SHROOM4Q9ULL8 1493 aa25.08■■□□□ 1.61
TRAP1-201ENST00000246957 SCRIBQ14160 1630 aa25.02■■□□□ 1.6
TRAP1-201ENST00000246957 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.58
TRAP1-201ENST00000246957 PABPN1Q86U42 306 aaKnown RBP eCLIP24.7■■□□□ 1.555e-7■□□□□ 9.8
TRAP1-201ENST00000246957 BICRAQ9NZM4 1560 aa24.6■■□□□ 1.53
TRAP1-201ENST00000246957 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
TRAP1-201ENST00000246957 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.41
TRAP1-201ENST00000246957 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
TRAP1-201ENST00000246957 SMARCA4P51532 1647 aa23.82■■□□□ 1.4
TRAP1-201ENST00000246957 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
TRAP1-201ENST00000246957 BAZ1AQ9NRL2 1556 aaPredicted RBP23.76■■□□□ 1.39
TRAP1-201ENST00000246957 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
TRAP1-201ENST00000246957 WIZO95785 1651 aa23.73■■□□□ 1.39
TRAP1-201ENST00000246957 DNAJC5BQ9UF47 199 aa23.71■■□□□ 1.39
TRAP1-201ENST00000246957 CC2D2AQ9P2K1 1620 aa23.68■■□□□ 1.38
TRAP1-201ENST00000246957 ATAD2BQ9ULI0 1458 aa23.52■■□□□ 1.36
TRAP1-201ENST00000246957 PEG3Q9GZU2 1588 aa23.42■■□□□ 1.34
TRAP1-201ENST00000246957 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
TRAP1-201ENST00000246957 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
TRAP1-201ENST00000246957 NCAPD3P42695 1498 aa23.31■■□□□ 1.32
TRAP1-201ENST00000246957 TOP2AP11388 1531 aaKnown RBP23.27■■□□□ 1.32
TRAP1-201ENST00000246957 HMGXB3Q12766 1538 aa23.24■■□□□ 1.31
TRAP1-201ENST00000246957 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
TRAP1-201ENST00000246957 NESP48681 1621 aa22.93■■□□□ 1.26
TRAP1-201ENST00000246957 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
TRAP1-201ENST00000246957 CFTRP13569 1480 aa22.7■■□□□ 1.22
TRAP1-201ENST00000246957 KIF21AQ7Z4S6 1674 aa22.63■■□□□ 1.21
TRAP1-201ENST00000246957 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
TRAP1-201ENST00000246957 LAMC3Q9Y6N6 1575 aa22.62■■□□□ 1.21
TRAP1-201ENST00000246957 ABCC8Q09428 1581 aa22.61■■□□□ 1.21
TRAP1-201ENST00000246957 FANCD2Q9BXW9 1451 aa22.53■■□□□ 1.2
TRAP1-201ENST00000246957 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
TRAP1-201ENST00000246957 PDS5BQ9NTI5 1447 aa22.43■■□□□ 1.18
TRAP1-201ENST00000246957 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
TRAP1-201ENST00000246957 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
TRAP1-201ENST00000246957 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
TRAP1-201ENST00000246957 CUX1P39880 1505 aa22.35■■□□□ 1.17
TRAP1-201ENST00000246957 URB2Q14146 1524 aaKnown RBP22.34■■□□□ 1.17
TRAP1-201ENST00000246957 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.161e-6■■■□□ 18.5
TRAP1-201ENST00000246957 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
TRAP1-201ENST00000246957 TOPBP1Q92547 1522 aa22.24■■□□□ 1.15
TRAP1-201ENST00000246957 TRIM41Q8WV44 630 aa22.24■■□□□ 1.15
TRAP1-201ENST00000246957 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
TRAP1-201ENST00000246957 DNMBPQ6XZF7 1577 aa22.2■■□□□ 1.14
TRAP1-201ENST00000246957 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
TRAP1-201ENST00000246957 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
TRAP1-201ENST00000246957 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
TRAP1-201ENST00000246957 WDR62O43379 1518 aa22.15■■□□□ 1.14
TRAP1-201ENST00000246957 RAD54L2Q9Y4B4 1467 aa22.13■■□□□ 1.13
TRAP1-201ENST00000246957 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
TRAP1-201ENST00000246957 CUX2O14529 1486 aa22.06■■□□□ 1.12
TRAP1-201ENST00000246957 FAM9AQ8IZU1 332 aaPredicted RBP22.05■■□□□ 1.12
TRAP1-201ENST00000246957 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
TRAP1-201ENST00000246957 SOGA1O94964 1423 aa22.02■■□□□ 1.12
TRAP1-201ENST00000246957 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
TRAP1-201ENST00000246957 ZNF608Q9ULD9 1512 aaPredicted RBP21.97■■□□□ 1.11
TRAP1-201ENST00000246957 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
TRAP1-201ENST00000246957 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
TRAP1-201ENST00000246957 WDR97A6NE52 1622 aa21.93■■□□□ 1.1
TRAP1-201ENST00000246957 AQRO60306 1485 aaKnown RBP eCLIP21.89■■□□□ 1.18e-7■■■■□ 22.8
TRAP1-201ENST00000246957 ABCA10Q8WWZ4 1543 aa21.84■■□□□ 1.09
TRAP1-201ENST00000246957 IFT140Q96RY7 1462 aa21.83■■□□□ 1.09
TRAP1-201ENST00000246957 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
TRAP1-201ENST00000246957 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
TRAP1-201ENST00000246957 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
TRAP1-201ENST00000246957 GAPVD1Q14C86 1478 aa21.75■■□□□ 1.07
TRAP1-201ENST00000246957 KIF27Q86VH2 1401 aa21.73■■□□□ 1.07
TRAP1-201ENST00000246957 LOC105371045A0A1W2PR82 267 aa21.68■■□□□ 1.06
TRAP1-201ENST00000246957 IGF1RP08069 1367 aa21.67■■□□□ 1.06
TRAP1-201ENST00000246957 CSRNP3Q8WYN3 585 aa21.64■■□□□ 1.06
TRAP1-201ENST00000246957 SNAPC4Q5SXM2 1469 aa21.63■■□□□ 1.05
TRAP1-201ENST00000246957 GRIN2BQ13224 1484 aa21.6■■□□□ 1.05
TRAP1-201ENST00000246957 FBLN2P98095 1184 aa21.58■■□□□ 1.04
TRAP1-201ENST00000246957 RAPGEF2Q9Y4G8 1499 aa21.56■■□□□ 1.04
TRAP1-201ENST00000246957 ERICH3Q5RHP9 1530 aa21.55■■□□□ 1.04
TRAP1-201ENST00000246957 ADAMTS12P58397 1594 aa21.54■■□□□ 1.04
TRAP1-201ENST00000246957 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
TRAP1-201ENST00000246957 EEA1Q15075 1411 aa21.52■■□□□ 1.04
TRAP1-201ENST00000246957 CHD1O14646 1710 aa21.52■■□□□ 1.04
TRAP1-201ENST00000246957 PRXQ9BXM0 1461 aa21.49■■□□□ 1.03
TRAP1-201ENST00000246957 CUL7Q14999 1698 aa21.48■■□□□ 1.03
TRAP1-201ENST00000246957 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
TRAP1-201ENST00000246957 KIF21BO75037 1637 aa21.44■■□□□ 1.02
TRAP1-201ENST00000246957 MAGI1Q96QZ7 1491 aaPredicted RBP21.44■■□□□ 1.02
TRAP1-201ENST00000246957 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
TRAP1-201ENST00000246957 FHAD1B1AJZ9 1412 aa21.43■■□□□ 1.02
TRAP1-201ENST00000246957 UBTFP17480 764 aaKnown RBP21.41■■□□□ 1.02
TRAP1-201ENST00000246957 SYNJ2O15056 1496 aa21.4■■□□□ 1.02
TRAP1-201ENST00000246957 GRIN2AQ12879 1464 aa21.38■■□□□ 1.01
TRAP1-201ENST00000246957 GOLGA3Q08378 1498 aa21.36■■□□□ 1.01
TRAP1-201ENST00000246957 CEP170Q5SW79 1584 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms