RNA–Protein interactions for RNA: ENST00000600105.5

PTOV1-213, Transcript of prostate tumor overexpressed 1, humanhuman

TSL 3

Gene PTOV1, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTOV1-213ENST00000600105 NISCHQ9Y2I1 1504 aa48■■■■■ 5.27
PTOV1-213ENST00000600105 ABCC9O60706 1549 aa43.99■■■■■ 4.63
PTOV1-213ENST00000600105 CCDC180Q9P1Z9 1646 aa43.26■■■■■ 4.52
PTOV1-213ENST00000600105 DNAJC5BQ9UF47 199 aa41.95■■■■■ 4.31
PTOV1-213ENST00000600105 RB1CC1Q8TDY2 1594 aa41.51■■■■■ 4.24
PTOV1-213ENST00000600105 NACADO15069 1562 aa41.08■■■■■ 4.17
PTOV1-213ENST00000600105 PABPN1Q86U42 306 aaKnown RBP eCLIP40.91■■■■■ 4.144e-6■■■□□ 16.1
PTOV1-213ENST00000600105 DCAF8L2P0C7V8 631 aa40.8■■■■■ 4.12
PTOV1-213ENST00000600105 UNC13AQ9UPW8 1703 aa40.59■■■■■ 4.09
PTOV1-213ENST00000600105 BICRAQ9NZM4 1560 aa40.42■■■■■ 4.06
PTOV1-213ENST00000600105 MYO15BQ96JP2 1530 aa40.32■■■■■ 4.04
PTOV1-213ENST00000600105 SHROOM4Q9ULL8 1493 aa39.7■■■■□ 3.95
PTOV1-213ENST00000600105 CC2D2AQ9P2K1 1620 aa39.68■■■■□ 3.94
PTOV1-213ENST00000600105 CECR2Q9BXF3 1484 aa39.68■■■■□ 3.94
PTOV1-213ENST00000600105 ZCCHC6Q5VYS8 1495 aaKnown RBP39.64■■■■□ 3.94
PTOV1-213ENST00000600105 DCAF1Q9Y4B6 1507 aa39.58■■■■□ 3.93
PTOV1-213ENST00000600105 SCRIBQ14160 1630 aa39.44■■■■□ 3.9
PTOV1-213ENST00000600105 EIF4G1Q04637 1599 aaKnown RBP39.44■■■■□ 3.9
PTOV1-213ENST00000600105 DNAJC5Q9H3Z4 198 aa38.91■■■■□ 3.82
PTOV1-213ENST00000600105 CUX2O14529 1486 aa38.12■■■■□ 3.69
PTOV1-213ENST00000600105 NCAPD3P42695 1498 aa37.99■■■■□ 3.67
PTOV1-213ENST00000600105 ERCC6Q03468 1493 aa37.96■■■■□ 3.67
PTOV1-213ENST00000600105 ATAD2BQ9ULI0 1458 aa37.8■■■■□ 3.64
PTOV1-213ENST00000600105 NESP48681 1621 aa37.64■■■■□ 3.62
PTOV1-213ENST00000600105 HMGXB3Q12766 1538 aa37.6■■■■□ 3.61
PTOV1-213ENST00000600105 SMARCA2P51531 1590 aa37.59■■■■□ 3.61
PTOV1-213ENST00000600105 SMARCA4P51532 1647 aa37.55■■■■□ 3.6
PTOV1-213ENST00000600105 BAZ1BQ9UIG0 1483 aaKnown RBP37.35■■■■□ 3.57
PTOV1-213ENST00000600105 THOC2Q8NI27 1593 aaKnown RBP37.33■■■■□ 3.57
PTOV1-213ENST00000600105 BAZ1AQ9NRL2 1556 aaPredicted RBP37.25■■■■□ 3.55
PTOV1-213ENST00000600105 PEG3Q9GZU2 1588 aa37.2■■■■□ 3.55
PTOV1-213ENST00000600105 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
PTOV1-213ENST00000600105 KIF21AQ7Z4S6 1674 aa37.05■■■■□ 3.52
PTOV1-213ENST00000600105 MROH2BQ7Z745 1585 aa37.01■■■■□ 3.52
PTOV1-213ENST00000600105 PDS5BQ9NTI5 1447 aa37.01■■■■□ 3.51
PTOV1-213ENST00000600105 TRIM41Q8WV44 630 aa36.92■■■■□ 3.5
PTOV1-213ENST00000600105 CADPSQ9ULU8 1353 aa36.81■■■■□ 3.48
PTOV1-213ENST00000600105 MRC2Q9UBG0 1479 aa36.74■■■■□ 3.47
PTOV1-213ENST00000600105 WDR62O43379 1518 aa36.67■■■■□ 3.46
PTOV1-213ENST00000600105 WIZO95785 1651 aa36.5■■■■□ 3.43
PTOV1-213ENST00000600105 CEP164Q9UPV0 1460 aa36.44■■■■□ 3.42
PTOV1-213ENST00000600105 FANCD2Q9BXW9 1451 aa36.37■■■■□ 3.41
PTOV1-213ENST00000600105 OSCARQ8IYS5 282 aa36.31■■■■□ 3.4
PTOV1-213ENST00000600105 CFTRP13569 1480 aa36.25■■■■□ 3.39
PTOV1-213ENST00000600105 URB2Q14146 1524 aaKnown RBP36.15■■■■□ 3.38
PTOV1-213ENST00000600105 RSF1Q96T23 1441 aaPredicted RBP36.01■■■■□ 3.36
PTOV1-213ENST00000600105 TOP2AP11388 1531 aaKnown RBP35.98■■■■□ 3.35
PTOV1-213ENST00000600105 RIMBP3CA6NJZ7 1639 aa35.9■■■■□ 3.34
PTOV1-213ENST00000600105 RIMBP3BA6NNM3 1639 aa35.9■■■■□ 3.34
PTOV1-213ENST00000600105 RIMBP3Q9UFD9 1639 aa35.9■■■■□ 3.34
PTOV1-213ENST00000600105 ZNF608Q9ULD9 1512 aaPredicted RBP35.83■■■■□ 3.33
PTOV1-213ENST00000600105 IFT140Q96RY7 1462 aa35.76■■■■□ 3.32
PTOV1-213ENST00000600105 ARHGEF11O15085 1522 aa35.73■■■■□ 3.31
PTOV1-213ENST00000600105 PRDM2Q13029 1718 aa35.71■■■■□ 3.31
PTOV1-213ENST00000600105 CCDC88BA6NC98 1476 aa35.63■■■■□ 3.29
PTOV1-213ENST00000600105 TOPBP1Q92547 1522 aa35.62■■■■□ 3.29
PTOV1-213ENST00000600105 CYB5RLQ6IPT4 315 aa35.54■■■■□ 3.28
PTOV1-213ENST00000600105 EIF4G3O43432 1585 aaKnown RBP35.52■■■■□ 3.28
PTOV1-213ENST00000600105 ABCC8Q09428 1581 aa35.43■■■■□ 3.26
PTOV1-213ENST00000600105 AQRO60306 1485 aaKnown RBP eCLIP35.42■■■■□ 3.261e-7■■■□□ 17.7
PTOV1-213ENST00000600105 DNMBPQ6XZF7 1577 aa35.4■■■■□ 3.26
PTOV1-213ENST00000600105 ARAP1Q96P48 1450 aa35.36■■■■□ 3.25
PTOV1-213ENST00000600105 CHD1O14646 1710 aa35.36■■■■□ 3.25
PTOV1-213ENST00000600105 TARBP1Q13395 1621 aaKnown RBP35.35■■■■□ 3.25
PTOV1-213ENST00000600105 TRHP20396 242 aaPredicted RBP35.3■■■■□ 3.24
PTOV1-213ENST00000600105 FBLN2P98095 1184 aa35.27■■■■□ 3.24
PTOV1-213ENST00000600105 POLA1P09884 1462 aaPredicted RBP35.22■■■■□ 3.23
PTOV1-213ENST00000600105 RAD54L2Q9Y4B4 1467 aa35.15■■■■□ 3.22
PTOV1-213ENST00000600105 TDRD9Q8NDG6 1382 aaKnown RBP35.1■■■■□ 3.21
PTOV1-213ENST00000600105 SOGA1O94964 1423 aa35.05■■■■□ 3.2
PTOV1-213ENST00000600105 SNAPC4Q5SXM2 1469 aa35■■■■□ 3.19
PTOV1-213ENST00000600105 CLASP1Q7Z460 1538 aa34.99■■■■□ 3.19
PTOV1-213ENST00000600105 FGD5Q6ZNL6 1462 aa34.9■■■■□ 3.18
PTOV1-213ENST00000600105 CHMP7Q8WUX9 453 aaPredicted RBP34.9■■■■□ 3.18
PTOV1-213ENST00000600105 WDR97A6NE52 1622 aa34.87■■■■□ 3.17
PTOV1-213ENST00000600105 SYNJ1O43426 1573 aa34.85■■■■□ 3.17
PTOV1-213ENST00000600105 MAGI1Q96QZ7 1491 aaPredicted RBP34.84■■■■□ 3.17
PTOV1-213ENST00000600105 GRIN2BQ13224 1484 aa34.8■■■■□ 3.16
PTOV1-213ENST00000600105 CUX1P39880 1505 aa34.8■■■■□ 3.16
PTOV1-213ENST00000600105 SYNJ2O15056 1496 aa34.76■■■■□ 3.15
PTOV1-213ENST00000600105 AEBP2Q6ZN18 517 aaPredicted RBP34.71■■■■□ 3.15
PTOV1-213ENST00000600105 GAPVD1Q14C86 1478 aa34.65■■■■□ 3.14
PTOV1-213ENST00000600105 PBRM1Q86U86 1689 aa34.57■■■■□ 3.12
PTOV1-213ENST00000600105 ABCA10Q8WWZ4 1543 aa34.47■■■■□ 3.11
PTOV1-213ENST00000600105 ABCA5Q8WWZ7 1642 aa34.46■■■■□ 3.11
PTOV1-213ENST00000600105 ERCC6L2Q5T890 1561 aa34.45■■■■□ 3.11
PTOV1-213ENST00000600105 GRIN2AQ12879 1464 aa34.36■■■■□ 3.09
PTOV1-213ENST00000600105 NUP160Q12769 1436 aa34.3■■■■□ 3.08
PTOV1-213ENST00000600105 CEP170Q5SW79 1584 aa34.29■■■■□ 3.08
PTOV1-213ENST00000600105 ADAMTS12P58397 1594 aa34.24■■■■□ 3.07
PTOV1-213ENST00000600105 WRNQ14191 1432 aaPredicted RBP eCLIP34.19■■■■□ 3.062e-6■■■□□ 16.7
PTOV1-213ENST00000600105 SHROOM2Q13796 1616 aa34.17■■■■□ 3.06
PTOV1-213ENST00000600105 FHAD1B1AJZ9 1412 aa34.13■■■■□ 3.05
PTOV1-213ENST00000600105 KIF13AQ9H1H9 1805 aa34.06■■■■□ 3.04
PTOV1-213ENST00000600105 TOP2BQ02880 1626 aa34.01■■■■□ 3.04
PTOV1-213ENST00000600105 BIVM-ERCC5R4GMW8 1640 aa34.01■■■■□ 3.04
PTOV1-213ENST00000600105 PRG4Q92954 1404 aaPredicted RBP34■■■■□ 3.03
PTOV1-213ENST00000600105 ERICH3Q5RHP9 1530 aa33.99■■■■□ 3.03
PTOV1-213ENST00000600105 JPH4Q96JJ6 628 aa33.95■■■■□ 3.03
PTOV1-213ENST00000600105 SUPT5HO00267 1087 aaKnown RBP33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms