RNA–Protein interactions for RNA: ENST00000530365.1

SORL1-209, Transcript of sortilin related receptor 1, humanhuman

TSL 5

Gene SORL1, Length 983 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-209ENST00000530365 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
SORL1-209ENST00000530365 ABCC9O60706 1549 aa23.61■■□□□ 1.37
SORL1-209ENST00000530365 CCDC180Q9P1Z9 1646 aa23.2■■□□□ 1.3
SORL1-209ENST00000530365 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
SORL1-209ENST00000530365 RB1CC1Q8TDY2 1594 aa22.28■■□□□ 1.16
SORL1-209ENST00000530365 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
SORL1-209ENST00000530365 NACADO15069 1562 aa22.04■■□□□ 1.12
SORL1-209ENST00000530365 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.11
SORL1-209ENST00000530365 UNC13AQ9UPW8 1703 aa21.72■■□□□ 1.07
SORL1-209ENST00000530365 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
SORL1-209ENST00000530365 MYO15BQ96JP2 1530 aa21.58■■□□□ 1.04
SORL1-209ENST00000530365 ZCCHC6Q5VYS8 1495 aaKnown RBP21.29■■□□□ 1
SORL1-209ENST00000530365 CECR2Q9BXF3 1484 aa21.27■■□□□ 1
SORL1-209ENST00000530365 SHROOM4Q9ULL8 1493 aa21.26■□□□□ 0.99
SORL1-209ENST00000530365 CC2D2AQ9P2K1 1620 aa21.26■□□□□ 0.99
SORL1-209ENST00000530365 SCRIBQ14160 1630 aa21.23■□□□□ 0.99
SORL1-209ENST00000530365 DCAF1Q9Y4B6 1507 aa21.21■□□□□ 0.99
SORL1-209ENST00000530365 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.97
SORL1-209ENST00000530365 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
SORL1-209ENST00000530365 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
SORL1-209ENST00000530365 CUX2O14529 1486 aa20.38■□□□□ 0.85
SORL1-209ENST00000530365 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
SORL1-209ENST00000530365 ATAD2BQ9ULI0 1458 aa20.27■□□□□ 0.84
SORL1-209ENST00000530365 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
SORL1-209ENST00000530365 NESP48681 1621 aa20.18■□□□□ 0.82
SORL1-209ENST00000530365 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
SORL1-209ENST00000530365 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
SORL1-209ENST00000530365 BAZ1BQ9UIG0 1483 aaKnown RBP20.1■□□□□ 0.81
SORL1-209ENST00000530365 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
SORL1-209ENST00000530365 THOC2Q8NI27 1593 aaKnown RBP19.96■□□□□ 0.79
SORL1-209ENST00000530365 LAMC3Q9Y6N6 1575 aa19.94■□□□□ 0.78
SORL1-209ENST00000530365 PEG3Q9GZU2 1588 aa19.91■□□□□ 0.78
SORL1-209ENST00000530365 TRIM41Q8WV44 630 aa19.89■□□□□ 0.77
SORL1-209ENST00000530365 MROH2BQ7Z745 1585 aa19.88■□□□□ 0.77
SORL1-209ENST00000530365 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
SORL1-209ENST00000530365 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
SORL1-209ENST00000530365 CADPSQ9ULU8 1353 aa19.76■□□□□ 0.75
SORL1-209ENST00000530365 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
SORL1-209ENST00000530365 WDR62O43379 1518 aa19.64■□□□□ 0.73
SORL1-209ENST00000530365 WIZO95785 1651 aa19.63■□□□□ 0.73
SORL1-209ENST00000530365 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
SORL1-209ENST00000530365 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
SORL1-209ENST00000530365 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
SORL1-209ENST00000530365 CFTRP13569 1480 aa19.45■□□□□ 0.7
SORL1-209ENST00000530365 URB2Q14146 1524 aaKnown RBP19.38■□□□□ 0.69
SORL1-209ENST00000530365 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
SORL1-209ENST00000530365 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
SORL1-209ENST00000530365 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
SORL1-209ENST00000530365 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
SORL1-209ENST00000530365 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
SORL1-209ENST00000530365 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
SORL1-209ENST00000530365 IFT140Q96RY7 1462 aa19.2■□□□□ 0.66
SORL1-209ENST00000530365 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
SORL1-209ENST00000530365 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
SORL1-209ENST00000530365 ARHGEF11O15085 1522 aa19.13■□□□□ 0.65
SORL1-209ENST00000530365 TOPBP1Q92547 1522 aa19.13■□□□□ 0.65
SORL1-209ENST00000530365 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
SORL1-209ENST00000530365 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
SORL1-209ENST00000530365 FBLN2P98095 1184 aa19.06■□□□□ 0.64
SORL1-209ENST00000530365 ABCC8Q09428 1581 aa19.05■□□□□ 0.64
SORL1-209ENST00000530365 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.641e-8■■□□□ 13.5
SORL1-209ENST00000530365 TRHP20396 242 aaPredicted RBP19.02■□□□□ 0.64
SORL1-209ENST00000530365 DNMBPQ6XZF7 1577 aa19.02■□□□□ 0.63
SORL1-209ENST00000530365 CHD1O14646 1710 aa18.97■□□□□ 0.63
SORL1-209ENST00000530365 TARBP1Q13395 1621 aaKnown RBP18.94■□□□□ 0.62
SORL1-209ENST00000530365 ARAP1Q96P48 1450 aa18.92■□□□□ 0.62
SORL1-209ENST00000530365 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
SORL1-209ENST00000530365 TDRD9Q8NDG6 1382 aaKnown RBP18.89■□□□□ 0.61
SORL1-209ENST00000530365 RAD54L2Q9Y4B4 1467 aa18.89■□□□□ 0.61
SORL1-209ENST00000530365 SOGA1O94964 1423 aa18.86■□□□□ 0.61
SORL1-209ENST00000530365 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
SORL1-209ENST00000530365 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
SORL1-209ENST00000530365 SNAPC4Q5SXM2 1469 aa18.81■□□□□ 0.6
SORL1-209ENST00000530365 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
SORL1-209ENST00000530365 SYNJ1O43426 1573 aa18.72■□□□□ 0.59
SORL1-209ENST00000530365 CLASP1Q7Z460 1538 aa18.72■□□□□ 0.59
SORL1-209ENST00000530365 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
SORL1-209ENST00000530365 GRIN2BQ13224 1484 aa18.71■□□□□ 0.59
SORL1-209ENST00000530365 WDR97A6NE52 1622 aa18.7■□□□□ 0.58
SORL1-209ENST00000530365 CUX1P39880 1505 aa18.69■□□□□ 0.58
SORL1-209ENST00000530365 SYNJ2O15056 1496 aa18.67■□□□□ 0.58
SORL1-209ENST00000530365 GAPVD1Q14C86 1478 aa18.61■□□□□ 0.57
SORL1-209ENST00000530365 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
SORL1-209ENST00000530365 ABCA10Q8WWZ4 1543 aa18.51■□□□□ 0.55
SORL1-209ENST00000530365 ABCA5Q8WWZ7 1642 aa18.49■□□□□ 0.55
SORL1-209ENST00000530365 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.55
SORL1-209ENST00000530365 ERCC6L2Q5T890 1561 aa18.46■□□□□ 0.55
SORL1-209ENST00000530365 GRIN2AQ12879 1464 aa18.46■□□□□ 0.54
SORL1-209ENST00000530365 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.54
SORL1-209ENST00000530365 CEP170Q5SW79 1584 aa18.4■□□□□ 0.54
SORL1-209ENST00000530365 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
SORL1-209ENST00000530365 NUP160Q12769 1436 aa18.38■□□□□ 0.53
SORL1-209ENST00000530365 FHAD1B1AJZ9 1412 aa18.35■□□□□ 0.53
SORL1-209ENST00000530365 TOP2BQ02880 1626 aa18.31■□□□□ 0.52
SORL1-209ENST00000530365 SHROOM2Q13796 1616 aa18.3■□□□□ 0.52
SORL1-209ENST00000530365 PRG4Q92954 1404 aaPredicted RBP18.29■□□□□ 0.52
SORL1-209ENST00000530365 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
SORL1-209ENST00000530365 ERICH3Q5RHP9 1530 aa18.27■□□□□ 0.51
SORL1-209ENST00000530365 JPH4Q96JJ6 628 aa18.26■□□□□ 0.51
SORL1-209ENST00000530365 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms