Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.44■□□□□ 0.7
FOXD3Q9UJU5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD3Q9UJU5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FOXD3Q9UJU5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 KRT18P14-201ENST00000534205 1250 ntBASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 TERF1P2-201ENST00000583350 1212 ntBASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 AC068587.7-201ENST00000641602 218 ntBASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXD3Q9UJU5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 AC090192.1-201ENST00000517740 490 ntBASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 AC105233.4-201ENST00000642045 216 ntBASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 AC233723.2-201ENST00000623798 2106 ntBASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 AC127496.7-201ENST00000625110 1798 ntBASIC19.42■□□□□ 0.7
FOXD3Q9UJU5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 NTF6G-201ENST00000591094 616 ntBASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD3Q9UJU5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 IKBKGP1-201ENST00000612193 1073 ntBASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD3Q9UJU5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXD3Q9UJU5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.39■□□□□ 0.7
FOXD3Q9UJU5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD3Q9UJU5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD3Q9UJU5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD3Q9UJU5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD3Q9UJU5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD3Q9UJU5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FOXD3Q9UJU5 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD3Q9UJU5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.38■□□□□ 0.69
FOXD3Q9UJU5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD3Q9UJU5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms