Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX6-2Q9C056 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NKX6-2Q9C056 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NKX6-2Q9C056 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NKX6-2Q9C056 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX6-2Q9C056 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-2Q9C056 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NKX6-2Q9C056 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.49■□□□□ 0.39
NKX6-2Q9C056 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 RP9P-202ENST00000450133 1212 ntBASIC17.48■□□□□ 0.39
NKX6-2Q9C056 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.48■□□□□ 0.39
NKX6-2Q9C056 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NKX6-2Q9C056 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-2Q9C056 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-2Q9C056 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-2Q9C056 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-2Q9C056 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-2Q9C056 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-2Q9C056 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NKX6-2Q9C056 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-2Q9C056 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NKX6-2Q9C056 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX6-2Q9C056 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms