Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SIMC1Q8NDZ2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SIMC1Q8NDZ2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SIMC1Q8NDZ2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SIMC1Q8NDZ2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
SIMC1Q8NDZ2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SIMC1Q8NDZ2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 AL031432.3-201ENST00000607698 485 ntBASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 AC139530.1-201ENST00000575312 1977 ntBASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SIMC1Q8NDZ2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.38■□□□□ 0.85
SIMC1Q8NDZ2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 AL139246.5-201ENST00000606645 996 ntBASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIMC1Q8NDZ2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 MIR638-201ENST00000385237 100 ntBASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIMC1Q8NDZ2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 AC008764.7-201ENST00000593779 1081 ntBASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 CA15P2-201ENST00000611168 834 ntBASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIMC1Q8NDZ2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 AC242852.2-201ENST00000615738 1807 ntBASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIMC1Q8NDZ2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms