Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TTC9CQ8N5M4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TTC9CQ8N5M4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 AC010141.3-201ENST00000456659 717 ntBASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 AP005435.1-201ENST00000529293 1178 ntBASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TTC9CQ8N5M4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 SLC47A1P1-202ENST00000449666 945 ntBASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 AL136162.1-201ENST00000607711 1078 ntBASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TTC9CQ8N5M4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC9CQ8N5M4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC9CQ8N5M4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TTC9CQ8N5M4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.08■□□□□ 0.33
TTC9CQ8N5M4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.08■□□□□ 0.32
TTC9CQ8N5M4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TTC9CQ8N5M4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.08■□□□□ 0.32
TTC9CQ8N5M4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.08■□□□□ 0.32
TTC9CQ8N5M4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TTC9CQ8N5M4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TTC9CQ8N5M4 C11orf96-202ENST00000528572 1834 ntBASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 AC135279.3-201ENST00000610945 1311 ntBASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 BX842568.3-201ENST00000418104 571 ntBASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.07■□□□□ 0.32
TTC9CQ8N5M4 AC024257.2-201ENST00000549699 147 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms