Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA13Q9Y5I0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA13Q9Y5I0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA13Q9Y5I0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHA13Q9Y5I0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA13Q9Y5I0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA13Q9Y5I0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHA13Q9Y5I0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHA13Q9Y5I0 MTDHP2-201ENST00000601468 714 ntBASIC23.23■■□□□ 1.31
PCDHA13Q9Y5I0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA13Q9Y5I0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA13Q9Y5I0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA13Q9Y5I0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA13Q9Y5I0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHA13Q9Y5I0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PCDHA13Q9Y5I0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA13Q9Y5I0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA13Q9Y5I0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 KRT125P-201ENST00000546827 989 ntBASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHA13Q9Y5I0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHA13Q9Y5I0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.2■■□□□ 1.3
PCDHA13Q9Y5I0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHA13Q9Y5I0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHA13Q9Y5I0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHA13Q9Y5I0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHA13Q9Y5I0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHA13Q9Y5I0 Z92544.1-202ENST00000571933 1220 ntBASIC23.2■■□□□ 1.3
PCDHA13Q9Y5I0 AL499627.2-201ENST00000606283 725 ntBASIC23.2■■□□□ 1.3
PCDHA13Q9Y5I0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PCDHA13Q9Y5I0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
PCDHA13Q9Y5I0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 MIR4787-201ENST00000607364 84 ntBASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA13Q9Y5I0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHA13Q9Y5I0 AC010997.5-201ENST00000609182 354 ntBASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms