Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.18■■□□□ 1.3
TWNKQ96RR1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.18■■□□□ 1.3
TWNKQ96RR1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TWNKQ96RR1 AC012676.1-201ENST00000574705 1949 ntBASIC23.18■■□□□ 1.3
TWNKQ96RR1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.17■■□□□ 1.3
TWNKQ96RR1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.17■■□□□ 1.3
TWNKQ96RR1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TWNKQ96RR1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
TWNKQ96RR1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
TWNKQ96RR1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TWNKQ96RR1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TWNKQ96RR1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.17■■□□□ 1.3
TWNKQ96RR1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TWNKQ96RR1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
TWNKQ96RR1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TWNKQ96RR1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TWNKQ96RR1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TWNKQ96RR1 LINC00526-201ENST00000581067 1875 ntBASIC23.16■■□□□ 1.3
TWNKQ96RR1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TWNKQ96RR1 MIR572-201ENST00000384983 95 ntBASIC23.16■■□□□ 1.3
TWNKQ96RR1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TWNKQ96RR1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TWNKQ96RR1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
TWNKQ96RR1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TWNKQ96RR1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TWNKQ96RR1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TWNKQ96RR1 AC139530.1-201ENST00000575312 1977 ntBASIC23.15■■□□□ 1.3
TWNKQ96RR1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TWNKQ96RR1 AC079089.2-201ENST00000531211 1277 ntBASIC23.15■■□□□ 1.3
TWNKQ96RR1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.15■■□□□ 1.3
TWNKQ96RR1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.15■■□□□ 1.3
TWNKQ96RR1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.15■■□□□ 1.3
TWNKQ96RR1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TWNKQ96RR1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TWNKQ96RR1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TWNKQ96RR1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TWNKQ96RR1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TWNKQ96RR1 IRS3P-201ENST00000223076 1006 ntBASIC23.14■■□□□ 1.29
TWNKQ96RR1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TWNKQ96RR1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.14■■□□□ 1.29
TWNKQ96RR1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TWNKQ96RR1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TWNKQ96RR1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.14■■□□□ 1.29
TWNKQ96RR1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.13■■□□□ 1.29
TWNKQ96RR1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TWNKQ96RR1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TWNKQ96RR1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TWNKQ96RR1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TWNKQ96RR1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TWNKQ96RR1 GUSBP5-202ENST00000510805 1989 ntBASIC23.13■■□□□ 1.29
TWNKQ96RR1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TWNKQ96RR1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.13■■□□□ 1.29
TWNKQ96RR1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.13■■□□□ 1.29
TWNKQ96RR1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.13■■□□□ 1.29
TWNKQ96RR1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TWNKQ96RR1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TWNKQ96RR1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TWNKQ96RR1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.13■■□□□ 1.29
TWNKQ96RR1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TWNKQ96RR1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
TWNKQ96RR1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TWNKQ96RR1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TWNKQ96RR1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TWNKQ96RR1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TWNKQ96RR1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.12■■□□□ 1.29
TWNKQ96RR1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TWNKQ96RR1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TWNKQ96RR1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TWNKQ96RR1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.12■■□□□ 1.29
TWNKQ96RR1 SMUG1P1-201ENST00000590640 811 ntBASIC23.12■■□□□ 1.29
TWNKQ96RR1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TWNKQ96RR1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.12■■□□□ 1.29
TWNKQ96RR1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
TWNKQ96RR1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
TWNKQ96RR1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.12■■□□□ 1.29
TWNKQ96RR1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TWNKQ96RR1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TWNKQ96RR1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.11■■□□□ 1.29
TWNKQ96RR1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TWNKQ96RR1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TWNKQ96RR1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TWNKQ96RR1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.11■■□□□ 1.29
TWNKQ96RR1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TWNKQ96RR1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TWNKQ96RR1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TWNKQ96RR1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TWNKQ96RR1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
TWNKQ96RR1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
TWNKQ96RR1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.1■■□□□ 1.29
TWNKQ96RR1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.1■■□□□ 1.29
TWNKQ96RR1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.1■■□□□ 1.29
TWNKQ96RR1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
TWNKQ96RR1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
TWNKQ96RR1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TWNKQ96RR1 AC105233.4-201ENST00000642045 216 ntBASIC23.1■■□□□ 1.29
TWNKQ96RR1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TWNKQ96RR1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TWNKQ96RR1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms