Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 CA15P2-201ENST00000611168 834 ntBASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VMA21Q3ZAQ7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VMA21Q3ZAQ7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
VMA21Q3ZAQ7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.52■□□□□ 0.39
VMA21Q3ZAQ7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
VMA21Q3ZAQ7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
VMA21Q3ZAQ7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VMA21Q3ZAQ7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 C11orf96-202ENST00000528572 1834 ntBASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.51■□□□□ 0.39
VMA21Q3ZAQ7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 MIR3181-201ENST00000578512 73 ntBASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 AL512631.2-201ENST00000604634 923 ntBASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 LINC00565-201ENST00000562710 2331 ntBASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 AC137767.1-201ENST00000602918 1920 ntBASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VMA21Q3ZAQ7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 DUX4L19-201ENST00000557448 1267 ntBASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 AC068587.7-201ENST00000641602 218 ntBASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.49■□□□□ 0.39
VMA21Q3ZAQ7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
VMA21Q3ZAQ7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms