Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.64■□□□□ 0.74
CDK5Q00535 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.64■□□□□ 0.74
CDK5Q00535 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5Q00535 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK5Q00535 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK5Q00535 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CDK5Q00535 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK5Q00535 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK5Q00535 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK5Q00535 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5Q00535 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5Q00535 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK5Q00535 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK5Q00535 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK5Q00535 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDK5Q00535 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5Q00535 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK5Q00535 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5Q00535 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5Q00535 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDK5Q00535 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CDK5Q00535 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5Q00535 BX664725.1-201ENST00000438252 379 ntBASIC19.63■□□□□ 0.73
CDK5Q00535 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDK5Q00535 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK5Q00535 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK5Q00535 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5Q00535 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5Q00535 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDK5Q00535 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5Q00535 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK5Q00535 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5Q00535 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5Q00535 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5Q00535 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5Q00535 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5Q00535 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK5Q00535 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK5Q00535 Z98882.1-201ENST00000622160 2253 ntBASIC19.62■□□□□ 0.73
CDK5Q00535 C17orf82-201ENST00000623772 1530 ntBASIC19.61■□□□□ 0.73
CDK5Q00535 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5Q00535 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5Q00535 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5Q00535 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5Q00535 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5Q00535 AC092028.1-203ENST00000608262 953 ntBASIC19.61■□□□□ 0.73
CDK5Q00535 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK5Q00535 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CDK5Q00535 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK5Q00535 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5Q00535 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDK5Q00535 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CDK5Q00535 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5Q00535 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5Q00535 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5Q00535 AL499627.2-201ENST00000606283 725 ntBASIC19.6■□□□□ 0.73
CDK5Q00535 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5Q00535 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5Q00535 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CDK5Q00535 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK5Q00535 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK5Q00535 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.6■□□□□ 0.73
CDK5Q00535 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK5Q00535 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5Q00535 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5Q00535 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.59■□□□□ 0.73
CDK5Q00535 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CDK5Q00535 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5Q00535 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5Q00535 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK5Q00535 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5Q00535 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CDK5Q00535 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDK5Q00535 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.58■□□□□ 0.73
CDK5Q00535 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5Q00535 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.58■□□□□ 0.72
CDK5Q00535 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5Q00535 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5Q00535 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5Q00535 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5Q00535 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5Q00535 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.58■□□□□ 0.72
CDK5Q00535 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDK5Q00535 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CDK5Q00535 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CDK5Q00535 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.57■□□□□ 0.72
CDK5Q00535 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.57■□□□□ 0.72
CDK5Q00535 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms