Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLP35914 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLP35914 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HMGCLP35914 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLP35914 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLP35914 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLP35914 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLP35914 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLP35914 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.72■■□□□ 1.07
HMGCLP35914 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.72■■□□□ 1.07
HMGCLP35914 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLP35914 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.72■■□□□ 1.07
HMGCLP35914 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.72■■□□□ 1.07
HMGCLP35914 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.72■■□□□ 1.07
HMGCLP35914 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLP35914 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.72■■□□□ 1.07
HMGCLP35914 TSPY26P-201ENST00000476365 1326 ntBASIC21.72■■□□□ 1.07
HMGCLP35914 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HMGCLP35914 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLP35914 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLP35914 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLP35914 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
HMGCLP35914 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLP35914 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLP35914 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLP35914 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.71■■□□□ 1.07
HMGCLP35914 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HMGCLP35914 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.71■■□□□ 1.07
HMGCLP35914 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.71■■□□□ 1.07
HMGCLP35914 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.71■■□□□ 1.07
HMGCLP35914 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLP35914 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
HMGCLP35914 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HMGCLP35914 LINC00526-201ENST00000581067 1875 ntBASIC21.71■■□□□ 1.07
HMGCLP35914 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
HMGCLP35914 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.7■■□□□ 1.07
HMGCLP35914 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HMGCLP35914 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLP35914 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLP35914 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLP35914 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.7■■□□□ 1.06
HMGCLP35914 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.7■■□□□ 1.06
HMGCLP35914 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.7■■□□□ 1.06
HMGCLP35914 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
HMGCLP35914 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLP35914 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.7■■□□□ 1.06
HMGCLP35914 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLP35914 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLP35914 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLP35914 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HMGCLP35914 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
HMGCLP35914 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
HMGCLP35914 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGCLP35914 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGCLP35914 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGCLP35914 ECEL1P1-201ENST00000373592 1742 ntBASIC21.69■■□□□ 1.06
HMGCLP35914 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HMGCLP35914 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMGCLP35914 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMGCLP35914 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HMGCLP35914 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.68■■□□□ 1.06
HMGCLP35914 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HMGCLP35914 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HMGCLP35914 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.68■■□□□ 1.06
HMGCLP35914 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.68■■□□□ 1.06
HMGCLP35914 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.68■■□□□ 1.06
HMGCLP35914 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.68■■□□□ 1.06
HMGCLP35914 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HMGCLP35914 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HMGCLP35914 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.68■■□□□ 1.06
HMGCLP35914 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGCLP35914 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HMGCLP35914 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGCLP35914 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.67■■□□□ 1.06
HMGCLP35914 MIR572-201ENST00000384983 95 ntBASIC21.67■■□□□ 1.06
HMGCLP35914 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
HMGCLP35914 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.67■■□□□ 1.06
HMGCLP35914 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.67■■□□□ 1.06
HMGCLP35914 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HMGCLP35914 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLP35914 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLP35914 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLP35914 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.66■■□□□ 1.06
HMGCLP35914 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLP35914 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.66■■□□□ 1.06
HMGCLP35914 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.66■■□□□ 1.06
HMGCLP35914 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLP35914 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGCLP35914 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.66■■□□□ 1.06
HMGCLP35914 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLP35914 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLP35914 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.65■■□□□ 1.06
HMGCLP35914 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.65■■□□□ 1.06
HMGCLP35914 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLP35914 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGCLP35914 AC105265.2-201ENST00000467189 838 ntBASIC21.65■■□□□ 1.06
HMGCLP35914 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.65■■□□□ 1.06
HMGCLP35914 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.65■■□□□ 1.06
HMGCLP35914 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.65■■□□□ 1.06
HMGCLP35914 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms