Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC33.62■■■□□ 2.97
COL17A1Q9UMD9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
COL17A1Q9UMD9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC33.62■■■□□ 2.97
COL17A1Q9UMD9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC33.62■■■□□ 2.97
COL17A1Q9UMD9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
COL17A1Q9UMD9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC33.62■■■□□ 2.97
COL17A1Q9UMD9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
COL17A1Q9UMD9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC33.61■■■□□ 2.97
COL17A1Q9UMD9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC33.61■■■□□ 2.97
COL17A1Q9UMD9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
COL17A1Q9UMD9 AC010331.1-201ENST00000611423 582 ntBASIC33.61■■■□□ 2.97
COL17A1Q9UMD9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC33.61■■■□□ 2.97
COL17A1Q9UMD9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC33.6■■■□□ 2.97
COL17A1Q9UMD9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
COL17A1Q9UMD9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC33.6■■■□□ 2.97
COL17A1Q9UMD9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
COL17A1Q9UMD9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC33.6■■■□□ 2.97
COL17A1Q9UMD9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
COL17A1Q9UMD9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.97
COL17A1Q9UMD9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
COL17A1Q9UMD9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
COL17A1Q9UMD9 FAM210CP-201ENST00000445714 574 ntBASIC33.59■■■□□ 2.97
COL17A1Q9UMD9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
COL17A1Q9UMD9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
COL17A1Q9UMD9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC33.59■■■□□ 2.97
COL17A1Q9UMD9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
COL17A1Q9UMD9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC33.58■■■□□ 2.97
COL17A1Q9UMD9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC33.58■■■□□ 2.97
COL17A1Q9UMD9 USP36-216ENST00000589424 970 ntTSL 5 BASIC33.58■■■□□ 2.97
COL17A1Q9UMD9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC33.58■■■□□ 2.97
COL17A1Q9UMD9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
COL17A1Q9UMD9 ECEL1P3-201ENST00000427961 737 ntBASIC33.57■■■□□ 2.97
COL17A1Q9UMD9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC33.57■■■□□ 2.96
COL17A1Q9UMD9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC33.57■■■□□ 2.96
COL17A1Q9UMD9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC33.57■■■□□ 2.96
COL17A1Q9UMD9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
COL17A1Q9UMD9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC33.56■■■□□ 2.96
COL17A1Q9UMD9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
COL17A1Q9UMD9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC33.56■■■□□ 2.96
COL17A1Q9UMD9 MYC-209ENST00000641252 345 ntBASIC33.56■■■□□ 2.96
COL17A1Q9UMD9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC33.56■■■□□ 2.96
COL17A1Q9UMD9 AC128676.1-201ENST00000454392 318 ntBASIC33.56■■■□□ 2.96
COL17A1Q9UMD9 UNC93B4-201ENST00000505679 747 ntBASIC33.56■■■□□ 2.96
COL17A1Q9UMD9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC33.56■■■□□ 2.96
COL17A1Q9UMD9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC33.56■■■□□ 2.96
COL17A1Q9UMD9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC33.55■■■□□ 2.96
COL17A1Q9UMD9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC33.55■■■□□ 2.96
COL17A1Q9UMD9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC33.55■■■□□ 2.96
COL17A1Q9UMD9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC33.55■■■□□ 2.96
COL17A1Q9UMD9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC33.55■■■□□ 2.96
COL17A1Q9UMD9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
COL17A1Q9UMD9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
COL17A1Q9UMD9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 HLA-L-211ENST00000482052 1765 ntBASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 AC006058.3-201ENST00000606217 1069 ntBASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
COL17A1Q9UMD9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
COL17A1Q9UMD9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC33.53■■■□□ 2.96
COL17A1Q9UMD9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC33.53■■■□□ 2.96
COL17A1Q9UMD9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
COL17A1Q9UMD9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
COL17A1Q9UMD9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
COL17A1Q9UMD9 CYP2T1P-201ENST00000432607 1285 ntBASIC33.52■■■□□ 2.96
COL17A1Q9UMD9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC33.52■■■□□ 2.96
COL17A1Q9UMD9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC33.52■■■□□ 2.96
COL17A1Q9UMD9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
COL17A1Q9UMD9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC33.52■■■□□ 2.96
COL17A1Q9UMD9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
COL17A1Q9UMD9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC33.51■■■□□ 2.96
COL17A1Q9UMD9 AC008550.1-201ENST00000511500 884 ntBASIC33.51■■■□□ 2.96
COL17A1Q9UMD9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC33.51■■■□□ 2.96
COL17A1Q9UMD9 AC010536.3-201ENST00000620306 533 ntBASIC33.51■■■□□ 2.96
COL17A1Q9UMD9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC33.51■■■□□ 2.96
COL17A1Q9UMD9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
COL17A1Q9UMD9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC33.51■■■□□ 2.96
COL17A1Q9UMD9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
COL17A1Q9UMD9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 AC092803.2-201ENST00000564287 1899 ntBASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
COL17A1Q9UMD9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms