Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 MIR3181-201ENST00000578512 73 ntBASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 AC068587.7-201ENST00000641602 218 ntBASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 AC133637.1-201ENST00000624115 1537 ntBASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 NFE2L3P1-201ENST00000588207 1959 ntBASIC14.13□□□□□ -0.15
LINC00474Q9P2X8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 AC136469.2-201ENST00000623944 1028 ntBASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LINC00474Q9P2X8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LINC00474Q9P2X8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 AC087239.1-201ENST00000622671 572 ntBASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 AC135279.3-201ENST00000610945 1311 ntBASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LINC00474Q9P2X8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 UNC93B3-201ENST00000308076 687 ntBASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 SERBP1P1-201ENST00000396021 1160 ntBASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LINC00474Q9P2X8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00474Q9P2X8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LINC00474Q9P2X8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms