Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CSNK1G1Q9HCP0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CSNK1G1Q9HCP0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
CSNK1G1Q9HCP0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.95■■□□□ 1.26
CSNK1G1Q9HCP0 YBX1P1-201ENST00000445822 960 ntBASIC22.95■■□□□ 1.26
CSNK1G1Q9HCP0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
CSNK1G1Q9HCP0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.95■■□□□ 1.26
CSNK1G1Q9HCP0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSNK1G1Q9HCP0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.95■■□□□ 1.26
CSNK1G1Q9HCP0 MIR6084-201ENST00000622012 110 ntBASIC22.95■■□□□ 1.26
CSNK1G1Q9HCP0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 AC079089.2-201ENST00000531211 1277 ntBASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.94■■□□□ 1.26
CSNK1G1Q9HCP0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 AC123595.1-201ENST00000440769 1046 ntBASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 C9orf163-202ENST00000624034 2573 ntBASIC22.93■■□□□ 1.26
CSNK1G1Q9HCP0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSNK1G1Q9HCP0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CSNK1G1Q9HCP0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.92■■□□□ 1.26
CSNK1G1Q9HCP0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.92■■□□□ 1.26
CSNK1G1Q9HCP0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CSNK1G1Q9HCP0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.92■■□□□ 1.26
CSNK1G1Q9HCP0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CSNK1G1Q9HCP0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 AC087623.3-201ENST00000607047 1098 ntBASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CSNK1G1Q9HCP0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSNK1G1Q9HCP0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSNK1G1Q9HCP0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSNK1G1Q9HCP0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSNK1G1Q9HCP0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSNK1G1Q9HCP0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CSNK1G1Q9HCP0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G1Q9HCP0 AC137767.1-201ENST00000602918 1920 ntBASIC22.89■■□□□ 1.25
CSNK1G1Q9HCP0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G1Q9HCP0 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.89■■□□□ 1.25
CSNK1G1Q9HCP0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G1Q9HCP0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.89■■□□□ 1.25
CSNK1G1Q9HCP0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.89■■□□□ 1.25
CSNK1G1Q9HCP0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G1Q9HCP0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G1Q9HCP0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CSNK1G1Q9HCP0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CSNK1G1Q9HCP0 BX005040.4-201ENST00000637145 1518 ntBASIC22.88■■□□□ 1.25
CSNK1G1Q9HCP0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CSNK1G1Q9HCP0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CSNK1G1Q9HCP0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
CSNK1G1Q9HCP0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CSNK1G1Q9HCP0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.88■■□□□ 1.25
CSNK1G1Q9HCP0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CSNK1G1Q9HCP0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.88■■□□□ 1.25
CSNK1G1Q9HCP0 ESRRAP2-201ENST00000418437 1549 ntBASIC22.87■■□□□ 1.25
CSNK1G1Q9HCP0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CSNK1G1Q9HCP0 C1orf229-201ENST00000623686 2258 ntBASIC22.87■■□□□ 1.25
CSNK1G1Q9HCP0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSNK1G1Q9HCP0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSNK1G1Q9HCP0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CSNK1G1Q9HCP0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.87■■□□□ 1.25
CSNK1G1Q9HCP0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
CSNK1G1Q9HCP0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms