Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIMC1Q8NDZ2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SIMC1Q8NDZ2 AC024257.2-201ENST00000549699 147 ntBASIC20.52■□□□□ 0.88
SIMC1Q8NDZ2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SIMC1Q8NDZ2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.52■□□□□ 0.88
SIMC1Q8NDZ2 LINC01960-201ENST00000563759 1884 ntBASIC20.52■□□□□ 0.87
SIMC1Q8NDZ2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SIMC1Q8NDZ2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 DUX4L19-201ENST00000557448 1267 ntBASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 AC110285.6-201ENST00000617652 491 ntBASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 EP400NL-214ENST00000641289 2402 ntBASIC20.51■□□□□ 0.87
SIMC1Q8NDZ2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 AL136162.1-201ENST00000607711 1078 ntBASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 AC080038.3-201ENST00000623346 1952 ntBASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIMC1Q8NDZ2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 AC136469.2-201ENST00000623944 1028 ntBASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIMC1Q8NDZ2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 GUSBP5-202ENST00000510805 1989 ntBASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 MIR4767-201ENST00000582827 78 ntBASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 AL138724.1-201ENST00000606771 1088 ntBASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 AC011298.3-201ENST00000615796 283 ntBASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIMC1Q8NDZ2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 AL121603.2-201ENST00000557373 2117 ntBASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.47■□□□□ 0.87
SIMC1Q8NDZ2 LINC00565-201ENST00000562710 2331 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms