Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 AC087239.1-201ENST00000622671 572 ntBASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC01555Q8NAE3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC01555Q8NAE3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC01555Q8NAE3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.08■□□□□ 0.97
LINC01555Q8NAE3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC01555Q8NAE3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC01555Q8NAE3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.08■□□□□ 0.97
LINC01555Q8NAE3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.08■□□□□ 0.97
LINC01555Q8NAE3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC01555Q8NAE3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
LINC01555Q8NAE3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
LINC01555Q8NAE3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 IRS3P-201ENST00000223076 1006 ntBASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 MIR572-201ENST00000384983 95 ntBASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 OXCT2P1-201ENST00000447263 1535 ntBASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
LINC01555Q8NAE3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC01555Q8NAE3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC01555Q8NAE3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC01555Q8NAE3 AC137767.1-201ENST00000602918 1920 ntBASIC21.06■□□□□ 0.96
LINC01555Q8NAE3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC01555Q8NAE3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LINC01555Q8NAE3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LINC01555Q8NAE3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LINC01555Q8NAE3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 AC133561.1-201ENST00000568600 2415 ntBASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC01555Q8NAE3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 ESRRAP2-201ENST00000418437 1549 ntBASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC01555Q8NAE3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC01555Q8NAE3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.02■□□□□ 0.96
LINC01555Q8NAE3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.02■□□□□ 0.95
LINC01555Q8NAE3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms