Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 CCDC92B-201ENST00000575506 885 ntBASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 IKBKGP1-201ENST00000612193 1073 ntBASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNAP47Q5SQN1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNAP47Q5SQN1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 AC022517.1-201ENST00000592429 346 ntBASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SNAP47Q5SQN1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SNAP47Q5SQN1 LINC02228-203ENST00000641970 1355 ntBASIC21.14■□□□□ 0.98
SNAP47Q5SQN1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 KRT18P14-201ENST00000534205 1250 ntBASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNAP47Q5SQN1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.13■□□□□ 0.97
SNAP47Q5SQN1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.12■□□□□ 0.97
SNAP47Q5SQN1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.11■□□□□ 0.97
SNAP47Q5SQN1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms