Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VMA21Q3ZAQ7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VMA21Q3ZAQ7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VMA21Q3ZAQ7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VMA21Q3ZAQ7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VMA21Q3ZAQ7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.6■□□□□ 0.41
VMA21Q3ZAQ7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.6■□□□□ 0.41
VMA21Q3ZAQ7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
VMA21Q3ZAQ7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VMA21Q3ZAQ7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VMA21Q3ZAQ7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.59■□□□□ 0.41
VMA21Q3ZAQ7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VMA21Q3ZAQ7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.59■□□□□ 0.41
VMA21Q3ZAQ7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.59■□□□□ 0.41
VMA21Q3ZAQ7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VMA21Q3ZAQ7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VMA21Q3ZAQ7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.58■□□□□ 0.41
VMA21Q3ZAQ7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
VMA21Q3ZAQ7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
VMA21Q3ZAQ7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
VMA21Q3ZAQ7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.58■□□□□ 0.41
VMA21Q3ZAQ7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 AL356441.2-201ENST00000443009 864 ntBASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 pRNA.6-201ENST00000610482 90 ntBASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 pRNA.5-201ENST00000612139 90 ntBASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 pRNA.11-201ENST00000618423 90 ntBASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 pRNA.13-201ENST00000619112 90 ntBASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.58■□□□□ 0.4
VMA21Q3ZAQ7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 AC099791.2-201ENST00000605725 427 ntBASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 AC080038.3-201ENST00000623346 1952 ntBASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 AC133637.1-201ENST00000624115 1537 ntBASIC17.57■□□□□ 0.4
VMA21Q3ZAQ7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VMA21Q3ZAQ7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 AC139530.1-201ENST00000575312 1977 ntBASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VMA21Q3ZAQ7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 AC006455.2-201ENST00000429931 906 ntBASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VMA21Q3ZAQ7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms