Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.71■■□□□ 1.23
CDH6P55285 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH6P55285 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.71■■□□□ 1.23
CDH6P55285 SYT6-210ENST00000641643 1587 ntBASIC22.71■■□□□ 1.23
CDH6P55285 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDH6P55285 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.71■■□□□ 1.23
CDH6P55285 AC092053.2-201ENST00000640557 1818 ntBASIC22.71■■□□□ 1.23
CDH6P55285 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CDH6P55285 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
CDH6P55285 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
CDH6P55285 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CDH6P55285 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CDH6P55285 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDH6P55285 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDH6P55285 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CDH6P55285 SERBP1P1-201ENST00000396021 1160 ntBASIC22.7■■□□□ 1.22
CDH6P55285 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.7■■□□□ 1.22
CDH6P55285 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
CDH6P55285 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CDH6P55285 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDH6P55285 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.69■■□□□ 1.22
CDH6P55285 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.69■■□□□ 1.22
CDH6P55285 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDH6P55285 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.69■■□□□ 1.22
CDH6P55285 AL136116.3-201ENST00000402907 1138 ntBASIC22.69■■□□□ 1.22
CDH6P55285 CA15P2-201ENST00000611168 834 ntBASIC22.69■■□□□ 1.22
CDH6P55285 LINC00565-201ENST00000562710 2331 ntBASIC22.69■■□□□ 1.22
CDH6P55285 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDH6P55285 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDH6P55285 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
CDH6P55285 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDH6P55285 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
CDH6P55285 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.68■■□□□ 1.22
CDH6P55285 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.68■■□□□ 1.22
CDH6P55285 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.68■■□□□ 1.22
CDH6P55285 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH6P55285 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.68■■□□□ 1.22
CDH6P55285 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH6P55285 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH6P55285 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.68■■□□□ 1.22
CDH6P55285 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH6P55285 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDH6P55285 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.68■■□□□ 1.22
CDH6P55285 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.68■■□□□ 1.22
CDH6P55285 DUX4L19-201ENST00000557448 1267 ntBASIC22.68■■□□□ 1.22
CDH6P55285 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CDH6P55285 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.68■■□□□ 1.22
CDH6P55285 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH6P55285 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.68■■□□□ 1.22
CDH6P55285 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH6P55285 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH6P55285 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH6P55285 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH6P55285 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDH6P55285 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.67■■□□□ 1.22
CDH6P55285 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CDH6P55285 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
CDH6P55285 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDH6P55285 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.67■■□□□ 1.22
CDH6P55285 AL031602.1-201ENST00000633169 911 ntBASIC22.67■■□□□ 1.22
CDH6P55285 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.67■■□□□ 1.22
CDH6P55285 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.67■■□□□ 1.22
CDH6P55285 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.67■■□□□ 1.22
CDH6P55285 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDH6P55285 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CDH6P55285 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
CDH6P55285 AC008406.3-201ENST00000620001 1374 ntBASIC22.66■■□□□ 1.22
CDH6P55285 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.66■■□□□ 1.22
CDH6P55285 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CDH6P55285 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CDH6P55285 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CDH6P55285 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH6P55285 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH6P55285 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH6P55285 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH6P55285 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CDH6P55285 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.66■■□□□ 1.22
CDH6P55285 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDH6P55285 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH6P55285 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.65■■□□□ 1.22
CDH6P55285 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH6P55285 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH6P55285 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDH6P55285 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
CDH6P55285 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
CDH6P55285 OR2I1P-207ENST00000453522 948 ntBASIC22.65■■□□□ 1.22
CDH6P55285 AL138724.1-201ENST00000606771 1088 ntBASIC22.65■■□□□ 1.22
CDH6P55285 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH6P55285 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CDH6P55285 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
CDH6P55285 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.65■■□□□ 1.22
CDH6P55285 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH6P55285 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.65■■□□□ 1.22
CDH6P55285 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH6P55285 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.64■■□□□ 1.22
CDH6P55285 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CDH6P55285 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDH6P55285 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH6P55285 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH6P55285 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms