Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeast

Predictions only

Length 422 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	P25441	snR63	snR63	255 nt		4.31	□□□□□ -1.72
RPC53	P25441	RPC17	YJL011C	486 nt		4.31	□□□□□ -1.72
RPC53	P25441	YPT53	YNL093W	663 nt		4.31	□□□□□ -1.72
RPC53	P25441	YOL024W	YOL024W	519 nt		4.31	□□□□□ -1.72
RPC53	P25441	MRPL37	YBR268W	318 nt		4.31	□□□□□ -1.72
RPC53	P25441	YBR225W	YBR225W	2703 nt		4.3	□□□□□ -1.72
RPC53	P25441	NCR1	YPL006W	3513 nt		4.3	□□□□□ -1.72
RPC53	P25441	PUB1	YNL016W	1362 nt		4.3	□□□□□ -1.72
RPC53	P25441	MCP2	YLR253W	1710 nt		4.3	□□□□□ -1.72
RPC53	P25441	YDR230W	YDR230W	348 nt		4.3	□□□□□ -1.72
RPC53	P25441	ATP5	YDR298C	639 nt		4.3	□□□□□ -1.72
RPC53	P25441	YGL188C	YGL188C	174 nt		4.3	□□□□□ -1.72
RPC53	P25441	YGR149W	YGR149W	1299 nt		4.3	□□□□□ -1.72
RPC53	P25441	MRPS35	YGR165W	1038 nt		4.3	□□□□□ -1.72
RPC53	P25441	YJR096W	YJR096W	849 nt		4.3	□□□□□ -1.72
RPC53	P25441	YNL144W-A	YNL144W-A	84 nt		4.3	□□□□□ -1.72
RPC53	P25441	GDT1	YBR187W	843 nt		4.3	□□□□□ -1.72
RPC53	P25441	STP22	YCL008C	1158 nt		4.3	□□□□□ -1.72
RPC53	P25441	VPS27	YNR006W	1869 nt		4.3	□□□□□ -1.72
RPC53	P25441	DIP2	YLR129W	2832 nt		4.3	□□□□□ -1.72
RPC53	P25441	AIM14	YGL160W	1713 nt		4.29	□□□□□ -1.72
RPC53	P25441	CPR1	YDR155C	489 nt		4.29	□□□□□ -1.72
RPC53	P25441	YUH1	YJR099W	711 nt		4.29	□□□□□ -1.72
RPC53	P25441	YAL065C	YAL065C	387 nt		4.29	□□□□□ -1.72
RPC53	P25441	YLR428C	YLR428C	345 nt		4.29	□□□□□ -1.72
RPC53	P25441	FOL3	YMR113W	1284 nt		4.29	□□□□□ -1.72
RPC53	P25441	PFA4	YOL003C	1137 nt		4.29	□□□□□ -1.72
RPC53	P25441	MNR2	YKL064W	2910 nt		4.29	□□□□□ -1.72
RPC53	P25441	PRS5	YOL061W	1491 nt		4.29	□□□□□ -1.72
RPC53	P25441	LOS1	YKL205W	3303 nt		4.29	□□□□□ -1.72
RPC53	P25441	USA1	YML029W	2517 nt		4.29	□□□□□ -1.72
RPC53	P25441	RPO21	YDL140C	5202 nt		4.28	□□□□□ -1.72
RPC53	P25441	CTK1	YKL139W	1587 nt		4.28	□□□□□ -1.72
RPC53	P25441	YCF1	YDR135C	4548 nt		4.28	□□□□□ -1.72
RPC53	P25441	CNN1	YFR046C	1086 nt		4.28	□□□□□ -1.72
RPC53	P25441	GTF1	YGR102C	552 nt		4.28	□□□□□ -1.72
RPC53	P25441	BIO2	YGR286C	1128 nt		4.28	□□□□□ -1.72
RPC53	P25441	YIL014C-A	YIL014C-A	315 nt		4.28	□□□□□ -1.72
RPC53	P25441	MCK1	YNL307C	1128 nt		4.28	□□□□□ -1.72
RPC53	P25441	VPS45	YGL095C	1734 nt		4.28	□□□□□ -1.72
RPC53	P25441	GCD1	YOR260W	1737 nt		4.28	□□□□□ -1.72
RPC53	P25441	SLM5	YCR024C	1479 nt		4.28	□□□□□ -1.72
RPC53	P25441	MSA1	YOR066W	1890 nt		4.28	□□□□□ -1.72
RPC53	P25441	GEM1	YAL048C	1989 nt		4.27	□□□□□ -1.73
RPC53	P25441	TCB3	YML072C	4638 nt		4.27	□□□□□ -1.73
RPC53	P25441	OSH2	YDL019C	3852 nt		4.27	□□□□□ -1.73
RPC53	P25441	YDL241W	YDL241W	372 nt		4.27	□□□□□ -1.73
RPC53	P25441	TOS8	YGL096W	831 nt		4.27	□□□□□ -1.73
RPC53	P25441	YHI9	YHR029C	885 nt		4.27	□□□□□ -1.73
RPC53	P25441	FUR1	YHR128W	651 nt		4.27	□□□□□ -1.73
RPC53	P25441	RSM25	YIL093C	795 nt		4.27	□□□□□ -1.73
RPC53	P25441	CDC73	YLR418C	1182 nt		4.27	□□□□□ -1.73
RPC53	P25441	PSF3	YOL146W	585 nt		4.27	□□□□□ -1.73
RPC53	P25441	AIP1	YMR092C	1848 nt		4.27	□□□□□ -1.73
RPC53	P25441	ULS1	YOR191W	4860 nt		4.27	□□□□□ -1.73
RPC53	P25441	RAD1	YPL022W	3303 nt		4.27	□□□□□ -1.73
RPC53	P25441	SSL1	YLR005W	1386 nt		4.27	□□□□□ -1.73
RPC53	P25441	PIM1	YBL022C	3402 nt		4.26	□□□□□ -1.73
RPC53	P25441	CWC2	YDL209C	1020 nt		4.26	□□□□□ -1.73
RPC53	P25441	RCR2	YDR003W	633 nt		4.26	□□□□□ -1.73
RPC53	P25441	RPS11A	YDR025W	471 nt		4.26	□□□□□ -1.73
RPC53	P25441	HSP42	YDR171W	1128 nt		4.26	□□□□□ -1.73
RPC53	P25441	IGO2	YHR132W-A	396 nt		4.26	□□□□□ -1.73
RPC53	P25441	YNL234W	YNL234W	1281 nt		4.26	□□□□□ -1.73
RPC53	P25441	YOR020W-A	YOR020W-A	273 nt		4.26	□□□□□ -1.73
RPC53	P25441	SNF2	YOR290C	5112 nt		4.26	□□□□□ -1.73
RPC53	P25441	MGR3	YMR115W	1506 nt		4.26	□□□□□ -1.73
RPC53	P25441	MTR10	YOR160W	2919 nt		4.25	□□□□□ -1.73
RPC53	P25441	NOC2	YOR206W	2133 nt		4.25	□□□□□ -1.73
RPC53	P25441	MEF1	YLR069C	2286 nt		4.25	□□□□□ -1.73
RPC53	P25441	RTS1	YOR014W	2274 nt		4.25	□□□□□ -1.73
RPC53	P25441	YFL040W	YFL040W	1623 nt		4.25	□□□□□ -1.73
RPC53	P25441	YCR007C	YCR007C	720 nt		4.25	□□□□□ -1.73
RPC53	P25441	MSW1	YDR268W	1140 nt		4.25	□□□□□ -1.73
RPC53	P25441	YHP1	YDR451C	1062 nt		4.25	□□□□□ -1.73
RPC53	P25441	CIR1	YGR207C	786 nt		4.25	□□□□□ -1.73
RPC53	P25441	ERV29	YGR284C	933 nt		4.25	□□□□□ -1.73
RPC53	P25441	YHR173C	YHR173C	339 nt		4.25	□□□□□ -1.73
RPC53	P25441	ATP12	YJL180C	978 nt		4.25	□□□□□ -1.73
RPC53	P25441	REE1	YJL217W	597 nt		4.25	□□□□□ -1.73
RPC53	P25441	YLR363W-A	YLR363W-A	258 nt		4.25	□□□□□ -1.73
RPC53	P25441	FLD1	YLR404W	858 nt		4.25	□□□□□ -1.73
RPC53	P25441	YML053C	YML053C	639 nt		4.25	□□□□□ -1.73
RPC53	P25441	YBL036C	YBL036C	774 nt		4.25	□□□□□ -1.73
RPC53	P25441	ISW2	YOR304W	3363 nt		4.25	□□□□□ -1.73
RPC53	P25441	OPY1	YBR129C	987 nt		4.25	□□□□□ -1.73
RPC53	P25441	FRM2	YCL026C-A	582 nt		4.25	□□□□□ -1.73
RPC53	P25441	AIM21	YIR003W	2040 nt		4.24	□□□□□ -1.73
RPC53	P25441	TCO89	YPL180W	2400 nt		4.24	□□□□□ -1.73
RPC53	P25441	VID28	YIL017C	2766 nt		4.24	□□□□□ -1.73
RPC53	P25441	YGL152C	YGL152C	678 nt		4.24	□□□□□ -1.73
RPC53	P25441	HIS5	YIL116W	1158 nt		4.24	□□□□□ -1.73
RPC53	P25441	AIM22	YJL046W	1230 nt		4.24	□□□□□ -1.73
RPC53	P25441	NRK1	YNL129W	723 nt		4.24	□□□□□ -1.73
RPC53	P25441	YBL094C	YBL094C	333 nt		4.24	□□□□□ -1.73
RPC53	P25441	YNR071C	YNR071C	1029 nt		4.24	□□□□□ -1.73
RPC53	P25441	TAF14	YPL129W	735 nt		4.24	□□□□□ -1.73
RPC53	P25441	POL1	YNL102W	4407 nt		4.24	□□□□□ -1.73
RPC53	P25441	ATG2	YNL242W	4779 nt		4.23	□□□□□ -1.73
RPC53	P25441	FAR8	YMR029C	1572 nt		4.23	□□□□□ -1.73

Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms