Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
CSNK1G3Q9Y6M4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 AC004911.1-201ENST00000416316 871 ntBASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 TPRG1LP1-201ENST00000598702 760 ntBASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CSNK1G3Q9Y6M4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSNK1G3Q9Y6M4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSNK1G3Q9Y6M4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSNK1G3Q9Y6M4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSNK1G3Q9Y6M4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.48■■□□□ 1.03
CSNK1G3Q9Y6M4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CSNK1G3Q9Y6M4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 AC010141.3-201ENST00000456659 717 ntBASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 AC004812.2-201ENST00000611079 2094 ntBASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSNK1G3Q9Y6M4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 AL353803.4-201ENST00000565882 1934 ntBASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CSNK1G3Q9Y6M4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CSNK1G3Q9Y6M4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 BX005040.4-201ENST00000637145 1518 ntBASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSNK1G3Q9Y6M4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSNK1G3Q9Y6M4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CSNK1G3Q9Y6M4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.44■■□□□ 1.02
CSNK1G3Q9Y6M4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.44■■□□□ 1.02
CSNK1G3Q9Y6M4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.44■■□□□ 1.02
CSNK1G3Q9Y6M4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.44■■□□□ 1.02
CSNK1G3Q9Y6M4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CSNK1G3Q9Y6M4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSNK1G3Q9Y6M4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.43■■□□□ 1.02
CSNK1G3Q9Y6M4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms