Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
XRN1Q8IZH2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC30.95■■■□□ 2.54
XRN1Q8IZH2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.54
XRN1Q8IZH2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC30.95■■■□□ 2.54
XRN1Q8IZH2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC30.95■■■□□ 2.54
XRN1Q8IZH2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC30.95■■■□□ 2.54
XRN1Q8IZH2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
XRN1Q8IZH2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC30.95■■■□□ 2.54
XRN1Q8IZH2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC30.95■■■□□ 2.54
XRN1Q8IZH2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC30.95■■■□□ 2.54
XRN1Q8IZH2 AC104187.1-201ENST00000607510 612 ntBASIC30.95■■■□□ 2.54
XRN1Q8IZH2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC30.94■■■□□ 2.54
XRN1Q8IZH2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
XRN1Q8IZH2 AC069152.1-201ENST00000438030 544 ntBASIC30.94■■■□□ 2.54
XRN1Q8IZH2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
XRN1Q8IZH2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
XRN1Q8IZH2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
XRN1Q8IZH2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
XRN1Q8IZH2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC30.93■■■□□ 2.54
XRN1Q8IZH2 AC231657.2-201ENST00000624556 255 ntBASIC30.93■■■□□ 2.54
XRN1Q8IZH2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
XRN1Q8IZH2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
XRN1Q8IZH2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
XRN1Q8IZH2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
XRN1Q8IZH2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC30.93■■■□□ 2.54
XRN1Q8IZH2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC30.93■■■□□ 2.54
XRN1Q8IZH2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC30.93■■■□□ 2.54
XRN1Q8IZH2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
XRN1Q8IZH2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC30.92■■■□□ 2.54
XRN1Q8IZH2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
XRN1Q8IZH2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
XRN1Q8IZH2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
XRN1Q8IZH2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
XRN1Q8IZH2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
XRN1Q8IZH2 AC005224.4-201ENST00000583262 1652 ntBASIC30.9■■■□□ 2.54
XRN1Q8IZH2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC30.9■■■□□ 2.54
XRN1Q8IZH2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC30.9■■■□□ 2.54
XRN1Q8IZH2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
XRN1Q8IZH2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
XRN1Q8IZH2 CNN2P6-201ENST00000439038 900 ntBASIC30.9■■■□□ 2.54
XRN1Q8IZH2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC30.89■■■□□ 2.54
XRN1Q8IZH2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
XRN1Q8IZH2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC30.89■■■□□ 2.54
XRN1Q8IZH2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC30.89■■■□□ 2.54
XRN1Q8IZH2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC30.89■■■□□ 2.53
XRN1Q8IZH2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
XRN1Q8IZH2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
XRN1Q8IZH2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
XRN1Q8IZH2 UQCRFS1P1-201ENST00000435169 820 ntBASIC30.88■■■□□ 2.53
XRN1Q8IZH2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
XRN1Q8IZH2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
XRN1Q8IZH2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
XRN1Q8IZH2 MYCNOS-205ENST00000641950 531 ntBASIC30.88■■■□□ 2.53
XRN1Q8IZH2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
XRN1Q8IZH2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC30.88■■■□□ 2.53
XRN1Q8IZH2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 AC005181.1-201ENST00000604782 1256 ntBASIC30.87■■■□□ 2.53
XRN1Q8IZH2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
XRN1Q8IZH2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC30.86■■■□□ 2.53
XRN1Q8IZH2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC30.85■■■□□ 2.53
XRN1Q8IZH2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC30.85■■■□□ 2.53
XRN1Q8IZH2 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
XRN1Q8IZH2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC30.84■■■□□ 2.53
XRN1Q8IZH2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC30.84■■■□□ 2.53
XRN1Q8IZH2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC30.84■■■□□ 2.53
XRN1Q8IZH2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC30.84■■■□□ 2.53
XRN1Q8IZH2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
XRN1Q8IZH2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.84■■■□□ 2.53
XRN1Q8IZH2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
XRN1Q8IZH2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
XRN1Q8IZH2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
XRN1Q8IZH2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC30.84■■■□□ 2.53
XRN1Q8IZH2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
XRN1Q8IZH2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
XRN1Q8IZH2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC30.83■■■□□ 2.53
XRN1Q8IZH2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms