Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 AL356441.2-201ENST00000443009 864 ntBASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 MTDHP2-201ENST00000601468 714 ntBASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 AC010997.5-201ENST00000609182 354 ntBASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SCUBE1Q8IWY4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SCUBE1Q8IWY4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.56■■□□□ 1.04
SCUBE1Q8IWY4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCUBE1Q8IWY4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
SCUBE1Q8IWY4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
SCUBE1Q8IWY4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SCUBE1Q8IWY4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.56■■□□□ 1.04
SCUBE1Q8IWY4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SCUBE1Q8IWY4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 KRT16P3-201ENST00000439127 1283 ntBASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 AC026310.3-201ENST00000625186 2373 ntBASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.55■■□□□ 1.04
SCUBE1Q8IWY4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SCUBE1Q8IWY4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SCUBE1Q8IWY4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCUBE1Q8IWY4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
SCUBE1Q8IWY4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
SCUBE1Q8IWY4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCUBE1Q8IWY4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.52■■□□□ 1.04
SCUBE1Q8IWY4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCUBE1Q8IWY4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.52■■□□□ 1.04
SCUBE1Q8IWY4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCUBE1Q8IWY4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCUBE1Q8IWY4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
SCUBE1Q8IWY4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.52■■□□□ 1.03
SCUBE1Q8IWY4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SCUBE1Q8IWY4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SCUBE1Q8IWY4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SCUBE1Q8IWY4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
SCUBE1Q8IWY4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCUBE1Q8IWY4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCUBE1Q8IWY4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SCUBE1Q8IWY4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCUBE1Q8IWY4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCUBE1Q8IWY4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCUBE1Q8IWY4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCUBE1Q8IWY4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.49■■□□□ 1.03
SCUBE1Q8IWY4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms