Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD4Q5XG99 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD4Q5XG99 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LYSMD4Q5XG99 AC142381.3-201ENST00000568208 1670 ntBASIC21.72■■□□□ 1.07
LYSMD4Q5XG99 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD4Q5XG99 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD4Q5XG99 AC138932.3-201ENST00000567634 1902 ntBASIC21.72■■□□□ 1.07
LYSMD4Q5XG99 AC079630.1-202ENST00000618127 1840 ntBASIC21.71■■□□□ 1.07
LYSMD4Q5XG99 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD4Q5XG99 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD4Q5XG99 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.71■■□□□ 1.07
LYSMD4Q5XG99 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD4Q5XG99 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD4Q5XG99 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.71■■□□□ 1.07
LYSMD4Q5XG99 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LYSMD4Q5XG99 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 OXCT2P1-201ENST00000447263 1535 ntBASIC21.7■■□□□ 1.06
LYSMD4Q5XG99 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD4Q5XG99 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LYSMD4Q5XG99 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LYSMD4Q5XG99 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.69■■□□□ 1.06
LYSMD4Q5XG99 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
LYSMD4Q5XG99 TMEM191A-211ENST00000637163 1067 ntBASIC21.69■■□□□ 1.06
LYSMD4Q5XG99 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
LYSMD4Q5XG99 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD4Q5XG99 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD4Q5XG99 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 CD99P1-205ENST00000527459 561 ntBASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 MFSD11-216ENST00000590393 1141 ntBASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LYSMD4Q5XG99 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD4Q5XG99 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.66■■□□□ 1.06
LYSMD4Q5XG99 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.66■■□□□ 1.06
LYSMD4Q5XG99 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD4Q5XG99 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.66■■□□□ 1.06
LYSMD4Q5XG99 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.66■■□□□ 1.06
LYSMD4Q5XG99 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
LYSMD4Q5XG99 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.66■■□□□ 1.06
LYSMD4Q5XG99 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.66■■□□□ 1.06
LYSMD4Q5XG99 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 AL121832.2-201ENST00000610979 668 ntBASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD4Q5XG99 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
LYSMD4Q5XG99 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.64■■□□□ 1.06
LYSMD4Q5XG99 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
LYSMD4Q5XG99 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD4Q5XG99 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD4Q5XG99 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD4Q5XG99 AL353803.4-201ENST00000565882 1934 ntBASIC21.64■■□□□ 1.05
LYSMD4Q5XG99 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.64■■□□□ 1.05
LYSMD4Q5XG99 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.64■■□□□ 1.05
LYSMD4Q5XG99 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
LYSMD4Q5XG99 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LYSMD4Q5XG99 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms