Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.46■□□□□ 0.71
CSNK1A1P48729 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.46■□□□□ 0.71
CSNK1A1P48729 AC011298.3-201ENST00000615796 283 ntBASIC19.46■□□□□ 0.71
CSNK1A1P48729 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1P48729 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1P48729 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1P48729 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1P48729 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK1A1P48729 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1P48729 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CSNK1A1P48729 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK1A1P48729 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1P48729 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1P48729 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1A1P48729 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1A1P48729 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.45■□□□□ 0.7
CSNK1A1P48729 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1A1P48729 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.45■□□□□ 0.7
CSNK1A1P48729 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.45■□□□□ 0.7
CSNK1A1P48729 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1A1P48729 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CSNK1A1P48729 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.45■□□□□ 0.7
CSNK1A1P48729 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1A1P48729 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1A1P48729 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CSNK1A1P48729 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CSNK1A1P48729 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1A1P48729 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1A1P48729 AC087742.1-201ENST00000575880 1738 ntBASIC19.45■□□□□ 0.7
CSNK1A1P48729 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CSNK1A1P48729 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CSNK1A1P48729 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.44■□□□□ 0.7
CSNK1A1P48729 AC136469.2-201ENST00000623944 1028 ntBASIC19.44■□□□□ 0.7
CSNK1A1P48729 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.44■□□□□ 0.7
CSNK1A1P48729 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 AC127496.7-201ENST00000625110 1798 ntBASIC19.44■□□□□ 0.7
CSNK1A1P48729 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1A1P48729 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.44■□□□□ 0.7
CSNK1A1P48729 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CSNK1A1P48729 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CSNK1A1P48729 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 UNC93B3-201ENST00000308076 687 ntBASIC19.43■□□□□ 0.7
CSNK1A1P48729 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 OR2I1P-207ENST00000453522 948 ntBASIC19.43■□□□□ 0.7
CSNK1A1P48729 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.43■□□□□ 0.7
CSNK1A1P48729 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.43■□□□□ 0.7
CSNK1A1P48729 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CSNK1A1P48729 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CSNK1A1P48729 GUSBP5-202ENST00000510805 1989 ntBASIC19.43■□□□□ 0.7
CSNK1A1P48729 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CSNK1A1P48729 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.42■□□□□ 0.7
CSNK1A1P48729 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CSNK1A1P48729 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.42■□□□□ 0.7
CSNK1A1P48729 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1A1P48729 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CSNK1A1P48729 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1A1P48729 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.42■□□□□ 0.7
CSNK1A1P48729 AL117328.2-201ENST00000624617 1940 ntBASIC19.42■□□□□ 0.7
CSNK1A1P48729 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CSNK1A1P48729 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CSNK1A1P48729 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CSNK1A1P48729 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.42■□□□□ 0.7
CSNK1A1P48729 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.41■□□□□ 0.7
CSNK1A1P48729 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.41■□□□□ 0.7
CSNK1A1P48729 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.41■□□□□ 0.7
CSNK1A1P48729 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.41■□□□□ 0.7
CSNK1A1P48729 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.41■□□□□ 0.7
CSNK1A1P48729 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.41■□□□□ 0.7
CSNK1A1P48729 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CSNK1A1P48729 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CSNK1A1P48729 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CSNK1A1P48729 PKD1P6-201ENST00000343738 4769 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms